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Fix issue in KL estimation using knn #870

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Run time

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Job	Run time
build (3.8, 1.5.1, 1)	16m 39s
build (3.8, 1.5.1, 1)	42m 27s
build (3.8, 1.5.1, 2)	16m 37s
build (3.8, 1.5.1, 2)	22m 37s
build (3.8, 1.5.1, 3)	14m 1s
build (3.8, 1.5.1, 3)	14m 1s
build (3.8, 1.5.1, 4)	12m 28s
build (3.8, 1.5.1, 4)	12m 28s
build (3.8, 1.5.1, 5)	11m 29s
build (3.8, 1.5.1, 5)	11m 29s
build (3.8, 1.5.1, 6)	10m 41s
build (3.8, 1.5.1, 6)	10m 41s
build (3.9, 1.5.1, 1)	6m 36s
build (3.9, 1.5.1, 1)	42m 15s
build (3.9, 1.5.1, 2)	6m 6s
build (3.9, 1.5.1, 2)	21m 57s
build (3.9, 1.5.1, 3)	5m 31s
build (3.9, 1.5.1, 3)	13m 37s
build (3.9, 1.5.1, 4)	5m 15s
build (3.9, 1.5.1, 4)	12m 31s
build (3.9, 1.5.1, 5)	4m 37s
build (3.9, 1.5.1, 5)	11m 35s
build (3.9, 1.5.1, 6)	4m 53s
build (3.9, 1.5.1, 6)	10m 45s
build (3.10, 1.5.1, 1)	16m 47s
build (3.10, 1.5.1, 1)	42m 58s
build (3.10, 1.5.1, 2)	16m 44s
build (3.10, 1.5.1, 2)	22m 10s
build (3.10, 1.5.1, 3)	13m 36s
build (3.10, 1.5.1, 3)	13m 36s
build (3.10, 1.5.1, 4)	12m 8s
build (3.10, 1.5.1, 4)	12m 8s
build (3.10, 1.5.1, 5)	11m 21s
build (3.10, 1.5.1, 5)	11m 21s
build (3.10, 1.5.1, 6)	10m 30s
build (3.10, 1.5.1, 6)	10m 30s
build (3.11, 1.5.1, 1)	16m 42s
build (3.11, 1.5.1, 1)	40m 26s
build (3.11, 1.5.1, 2)	16m 41s
build (3.11, 1.5.1, 2)	20m 15s
build (3.11, 1.5.1, 3)	12m 47s
build (3.11, 1.5.1, 3)	12m 47s
build (3.11, 1.5.1, 4)	11m 43s
build (3.11, 1.5.1, 4)	11m 43s
build (3.11, 1.5.1, 5)	11m 0s
build (3.11, 1.5.1, 5)	11m 0s
build (3.11, 1.5.1, 6)	9m 56s
build (3.11, 1.5.1, 6)	9m 56s
	12h 0m 1s