Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

PointCloud to Graph Protein Lifting (PointCloud to Graph) #42

Open
wants to merge 53 commits into
base: main
Choose a base branch
from
Open

PointCloud to Graph Protein Lifting (PointCloud to Graph) #42

wants to merge 53 commits into from

Commits on May 13, 2024

  1. update

    @bertranMiquel
    bertranMiquel committed May 13, 2024
    Configuration menu
    Copy the full SHA
    62ce27f View commit details
    Browse the repository at this point in the history

Commits on Jun 13, 2024

  1. First ring-based commit

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    e8a35dc View commit details
    Browse the repository at this point in the history

  2. Merge remote-tracking branch 'upstream/main' 

    Update code due to changes on original repo
    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    1385b4e View commit details
    Browse the repository at this point in the history

  3. Readme update

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    82c6b25 View commit details
    Browse the repository at this point in the history

  4. mol ring lifting correctation

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    4be4aa6 View commit details
    Browse the repository at this point in the history

  5. Correct more errors

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    02ea2bf View commit details
    Browse the repository at this point in the history

  6. Fix lifting details

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    a83f484 View commit details
    Browse the repository at this point in the history

  7. Hope it is the last one

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    cd936f7 View commit details
    Browse the repository at this point in the history

  8. Deleting other test since they are using other test dataset

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    431e246 View commit details
    Browse the repository at this point in the history

  9. git ignore modification

    @bertranMiquel
    bertranMiquel committed Jun 13, 2024
    Configuration menu
    Copy the full SHA
    ae365b5 View commit details
    Browse the repository at this point in the history

Commits on Jun 14, 2024

  1. minor modifications

    @bertranMiquel
    bertranMiquel committed Jun 14, 2024
    Configuration menu
    Copy the full SHA
    b201b54 View commit details
    Browse the repository at this point in the history

  2. Update ring_lifting.py

    @bertranMiquel
    bertranMiquel authored Jun 14, 2024
    Configuration menu
    Copy the full SHA
    917799b View commit details
    Browse the repository at this point in the history

Commits on Jun 15, 2024

  1. Ring lifting modifications

    @bertranMiquel
    bertranMiquel committed Jun 15, 2024
    Configuration menu
    Copy the full SHA
    a7534a8 View commit details
    Browse the repository at this point in the history

Commits on Jun 18, 2024

  1. Update dependencies

    @bertranMiquel
    bertranMiquel committed Jun 18, 2024
    Configuration menu
    Copy the full SHA
    b884a92 View commit details
    Browse the repository at this point in the history

Commits on Jun 20, 2024

  1. Updates due to warnings

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    1da64be View commit details
    Browse the repository at this point in the history

  2. Reload tests

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    2f35444 View commit details
    Browse the repository at this point in the history

  3. Trail spaces

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    9ab1d8a View commit details
    Browse the repository at this point in the history

  4. Changes in test manual data.

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    59735bd View commit details
    Browse the repository at this point in the history

  5. Remove space

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    2e30876 View commit details
    Browse the repository at this point in the history

  6. Refine test.

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    28e7b74 View commit details
    Browse the repository at this point in the history

  7. Remove notebook

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    704e2e1 View commit details
    Browse the repository at this point in the history

  8. correct torch in test

    @bertranMiquel
    bertranMiquel committed Jun 20, 2024
    Configuration menu
    Copy the full SHA
    a07528f View commit details
    Browse the repository at this point in the history

Commits on Jul 1, 2024

  1. Adding attributes functions

    @bertranMiquel
    bertranMiquel committed Jul 1, 2024
    Configuration menu
    Copy the full SHA
    db73c5e View commit details
    Browse the repository at this point in the history

  2. Adding attributes

    @bertranMiquel
    bertranMiquel committed Jul 1, 2024
    Configuration menu
    Copy the full SHA
    0bbc8cd View commit details
    Browse the repository at this point in the history

Commits on Jul 3, 2024

  1. Load UniProt data

    @bertranMiquel
    bertranMiquel committed Jul 3, 2024
    Configuration menu
    Copy the full SHA
    0783baf View commit details
    Browse the repository at this point in the history

Commits on Jul 4, 2024

  1. Trying lifting stuff

    @bertranMiquel
    bertranMiquel committed Jul 4, 2024
    Configuration menu
    Copy the full SHA
    29608e8 View commit details
    Browse the repository at this point in the history

Commits on Jul 5, 2024

  1. Lifting try

    @bertranMiquel
    bertranMiquel committed Jul 5, 2024
    Configuration menu
    Copy the full SHA
    456dddc View commit details
    Browse the repository at this point in the history

Commits on Jul 8, 2024

  1. All developed

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    06b2084 View commit details
    Browse the repository at this point in the history

  2. Comments updated

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    7a7d2df View commit details
    Browse the repository at this point in the history

  3. Update readme

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    cf7ffb7 View commit details
    Browse the repository at this point in the history

  4. Remove random package

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    530a198 View commit details
    Browse the repository at this point in the history

  5. update size parameter

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    e1f83a3 View commit details
    Browse the repository at this point in the history

  6. Change size parameter

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    44e083d View commit details
    Browse the repository at this point in the history

  7. Change attributes to mass function name

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    c406216 View commit details
    Browse the repository at this point in the history

  8. Update import class

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    7c46cb9 View commit details
    Browse the repository at this point in the history

  9. Update import class

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    9cc415a View commit details
    Browse the repository at this point in the history

  10. Add parameter to test

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    d1f49f6 View commit details
    Browse the repository at this point in the history

  11. Finish test data

    @bertranMiquel
    bertranMiquel committed Jul 8, 2024
    Configuration menu
    Copy the full SHA
    0fbae67 View commit details
    Browse the repository at this point in the history

Commits on Jul 9, 2024

  1. Updata load manual data

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    932b9b3 View commit details
    Browse the repository at this point in the history

  2. Merge branch 'uniprot_knn' of github.com:bertranMiquel/challenge-icml… 

    …-2024 into uniprot_knn
    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    fbecc31 View commit details
    Browse the repository at this point in the history

  3. Pointcloud to graph lifting. First try.

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    48aeaa4 View commit details
    Browse the repository at this point in the history

  4. Rectify test data import

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    78c91fe View commit details
    Browse the repository at this point in the history

  5. Rectify tests

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    f924f79 View commit details
    Browse the repository at this point in the history

  6. Rectify test results

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    9ea1b6b View commit details
    Browse the repository at this point in the history

  7. clone vectors in angle

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    84cfe5b View commit details
    Browse the repository at this point in the history

  8. Minor corrections

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    fbf6a7b View commit details
    Browse the repository at this point in the history

  9. Correct last assert

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    c85b1b8 View commit details
    Browse the repository at this point in the history

  10. clone to copy adjust

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    bd7d0d8 View commit details
    Browse the repository at this point in the history

  11. ruff import adjust

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    860c0e2 View commit details
    Browse the repository at this point in the history

  12. Add feature_lifting

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    30025fb View commit details
    Browse the repository at this point in the history

  13. Remove cell

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    dea738e View commit details
    Browse the repository at this point in the history

  14. Last try

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    ebbe527 View commit details
    Browse the repository at this point in the history

  15. Clean tutorials

    @bertranMiquel
    bertranMiquel committed Jul 9, 2024
    Configuration menu
    Copy the full SHA
    4ff6054 View commit details
    Browse the repository at this point in the history