ManeLoca (MANE Locus) is a web tool that helps locate genomic coordinates within MANE Select transcripts.
Use ManeLoca Online
ManeLoca is a React-based web application that allows users to easily find the corresponding position in MANE Select transcripts given a genomic coordinate. MANE (Matched Annotation from NCBI and EMBL-EBI) Select transcripts represent a high-confidence set of human transcript annotations agreed upon by both NCBI and Ensembl.
- Simple and intuitive user interface
- Convert genomic coordinates to MANE transcript positions
- Support for GRCh38/GRCh37 genome assembly
- Detailed transcript information display
git clone https://github.com/pzweuj/ManeLoca.git
cd ManeLoca
# database update (option)
git clone https://github.com/pzweuj/ManeSelectBed.git
python merge_data.py
# Run
npm install
npm run dev