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@qhgenomics

Genomics Cloud Compute

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  1. BacTraq BacTraq Public

    SNP-based clustering with consistent naming.

    Python 2

  2. abricate abricate Public

    Forked from tseemann/abricate

    🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

    Perl

  3. nullarbor nullarbor Public

    Forked from tseemann/nullarbor

    💾 📃 "Reads to report" for public health and clinical microbiology

    Perl

  4. mlst mlst Public

    Forked from tseemann/mlst

    🆔 Scan contig files against PubMLST typing schemes

    Perl

  5. snippy snippy Public

    Forked from tseemann/snippy

    ✂️ ⚡ Rapid haploid variant calling and core genome alignment

    Perl

  6. prokka prokka Public

    Forked from tseemann/prokka

    ⚡ ♒ Rapid prokaryotic genome annotation

    Perl

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