-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
* StarPrincipal * QUILT_ROLE_ARN * refactor projenrc * test events * aws-lambda-python-alpha * stub packager * create PythonFunction * pytest-watcher * test_event["outputUri"] in result["body"] * poetry remove flake8 * GATKReport * QUILT_METADATA vs FASTQ_SENTINEL * Constants * drop gsalib dependency made Lambda crash - not in requirements.txt?!? * PYTHON_INDEX * pull config files instance-scheduler * fix docker config * drop quiltcore for quilt3 pyarrow too large - layer? * test python types * handler takes LambdaContext * disable pytest Hard to run Python/Poetry in GitHub Action https://github.com/abatilo/actions-poetry * handle missing client_context.env
- Loading branch information
Showing
33 changed files
with
13,241 additions
and
45 deletions.
There are no files selected for viewing
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,3 @@ | ||
{ | ||
"python.analysis.typeCheckingMode": "basic" | ||
} |
Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.
Oops, something went wrong.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,7 @@ | ||
[run] | ||
branch = true | ||
source = instance_scheduler | ||
|
||
[report] | ||
exclude_lines = | ||
if TYPE_CHECKING: |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,3 @@ | ||
{ | ||
"python.analysis.typeCheckingMode": "basic" | ||
} |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,22 @@ | ||
PROJECT=packager | ||
sinclude ../Makefile.include | ||
|
||
.PHONY: all clean lint install test watch | ||
|
||
all: install test | ||
|
||
clean: | ||
rm -rf .pytest_cache | ||
|
||
install: | ||
poetry install | ||
|
||
test: lint | ||
poetry run pytest | ||
|
||
watch: | ||
poetry run ptw --now . | ||
|
||
lint: | ||
poetry run mypy packager | ||
poetry run black . |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,3 @@ | ||
# Packager | ||
|
||
Python Lambda to create a Quilt package from an S3 URI |
Oops, something went wrong.