test events

quiltdata · Dec 10, 2023 · f0182fd · f0182fd
1 parent 112f7a9
commit f0182fd
Show file tree

Hide file tree

Showing 4 changed files with 24 additions and 5 deletions.
diff --git a/.projenrc.ts b/.projenrc.ts
@@ -33,13 +33,13 @@ project.synth();
 
 
 function override_file_key(file: string, key: string) {
-  const KEYS = "AWS_ACCESS_KEY_ID AWS_SECRET_ACCESS_KEY AWS_ACCOUNT_ID AWS_DEFAULT_REGION CDK_APP_NAME CDK_DEFAULT_EMAIL QUILT_CATALOG_DOMAIN".split(" ");
-  var opts: {[key: string]: string} = {CI: 'true'};
+  const KEYS = 'AWS_ACCESS_KEY_ID AWS_SECRET_ACCESS_KEY AWS_ACCOUNT_ID AWS_DEFAULT_REGION CDK_APP_NAME CDK_DEFAULT_EMAIL QUILT_CATALOG_DOMAIN'.split(' ');
+  var opts: {[key: string]: string} = { CI: 'true' };
   for (const k of KEYS) {
     opts[k] = `\${{ secrets.${k} }}`;
   }
-  opts.CDK_DEFAULT_ACCOUNT = opts['AWS_ACCOUNT_ID'];
-  opts.CDK_DEFAULT_REGION = opts['AWS_DEFAULT_REGION'];
+  opts.CDK_DEFAULT_ACCOUNT = opts.AWS_ACCOUNT_ID;
+  opts.CDK_DEFAULT_REGION = opts.AWS_DEFAULT_REGION;
 
   project.tryFindObjectFile(file)?.addOverride(key, opts);
 }

diff --git a/src/omics-quilt.ts b/src/omics-quilt.ts
@@ -3,6 +3,7 @@ import { Rule } from 'aws-cdk-lib/aws-events';
 import { SnsTopic } from 'aws-cdk-lib/aws-events-targets';
 import {
   AccountPrincipal,
+  ArnPrincipal,
   ManagedPolicy,
   PolicyStatement,
   Role,
@@ -22,7 +23,6 @@ import { EmailSubscription } from 'aws-cdk-lib/aws-sns-subscriptions';
 import { StringParameter } from 'aws-cdk-lib/aws-ssm';
 import { type Construct } from 'constructs';
 import { Constants } from './constants';
-import { ArnPrincipal } from 'aws-cdk-lib/aws-iam';
 
 export class OmicsQuiltStack extends Stack {
   public readonly inputBucket: Bucket;

diff --git a/test/events/event-fastq.json → test/events/event-input.json b/test/events/event-fastq.json → test/events/event-input.json
diff --git a/test/events/event-output.json b/test/events/event-output.json
@@ -0,0 +1,19 @@
+{
+    "version": "0",
+    "id": "7adb44c4-b4c1-feea-0570-b4d8b8f883ff",
+    "detail-type": "Run Status Change",
+    "source": "aws.omics",
+    "account": "712023778557",
+    "time": "2023-12-07T23:29:30Z",
+    "region": "us-east-1",
+    "resources": [
+        "arn:aws:omics:us-east-1:712023778557:run/8637245"
+    ],
+    "detail": {
+        "omicsVersion": "1.0.0",
+        "arn": "arn:aws:omics:us-east-1:712023778557:run/8637245",
+        "status": "COMPLETED",
+        "uuid": "b8c62310-1612-b461-a257-04f3b9c282d2",
+        "runOutputUri": "s3://omics-quilt-omicsquiltckaoutput712023778557useast-1r7hdb9111n3i/outputs/8637245"
+    }
+}