Using Software

This is a basic repository of software modules (meaning lua files, which basically add a folder with a software’s executable to your path).

To use it you need to include the following line in your .bashrc, or a separate .modules file (details below)

    module use /share/PI/langlotz/software/modules

Then you can activate a module like:

    module load anaconda3

to verify that it works type:

  $ which python
  /share/PI/langlotz/software/anaconda3/bin/python

To ensure that a specific software is always loaded, I would recommend creating a file called .modules in your home directory:

  $ cd $HOME
  touch .modules
  echo  “module use /share/PI/langlotz/software/modules” >> .modules
  echo  “module load anaconda3” >> .modules

And then source that file in your .bashrc or .bash_profile

  echo  “source $HOME/.modules” >> $HOME/.bash_profile

You can also load them as needed.

Software Included

• python stack (anaconda2) and (anaconda3)
• rmate (for file remote editing over ssh; see: https://atom.io/packages/remote-atom)

Installing Python Packages for a single user:

  pip install --user <package>