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(Optional) Use conda environment

conda create --name mlinvitrotox
conda activate mlinvitrotox
conda install pip

Install dependencies

pip install -r requirements.txt

Running pipeline:

  • Replace python with python3 or py depending on your python version Main ML pipeline:
python ml\src\pipeline\ml_pipeline.py

Metadata ML pipeline:

python ml\src\pipeline\metadata_ml_pipeline.py

Post ML pipeline:

python ml\src\pipeline\post_ml_pipeline.py

Feature importance:

python ml\src\pipeline\feature_importance.py

Running streamlit app:

streamlit run ml\src\app\Results.py

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