Feature/better compression (#5) #3
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| name: GitHub Actions CI | |
| on: | |
| push: | |
| branches: [ master, develop, main] | |
| paths-ignore: | |
| - '**.md' | |
| workflow_dispatch: | |
| jobs: | |
| ######################################################################################## | |
| make: | |
| name: Make | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| machine: [ubuntu-latest, macOS-12] | |
| runs-on: ['${{ matrix.machine }}'] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| submodules: recursive | |
| - name: make | |
| run: | | |
| g++ --version | |
| make -j CXX=g++-12 | |
| - name: tar artifacts | |
| run: tar -cvf lz-ani.tar ./lz-ani ./test | |
| - uses: actions/upload-artifact@v4 | |
| with: | |
| name: executable-artifact-${{ matrix.machine }} | |
| path: ./lz-ani.tar | |
| ######################################################################################## | |
| vir61: | |
| needs: make | |
| name: Virus data | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| machine: [ubuntu-latest, macOS-12] | |
| runs-on: ['${{ matrix.machine }}'] | |
| steps: | |
| - uses: actions/download-artifact@v4 | |
| with: | |
| name: executable-artifact-${{ matrix.machine }} | |
| path: ./ | |
| - name: untar artifacts | |
| run: | | |
| tar -xf lz-ani.tar | |
| - name: build | |
| run: | | |
| ./lz-ani all2all --in-dir ./test/vir61 --out ani.tsv | |
| cmp ani.tsv ./test/vir61.ani.tsv | |