Update pythonpackage.yml #253
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| name: Python package | ||
| on: | ||
| push: | ||
| pull_request: | ||
| schedule: | ||
| - cron: '0 0 1 * *' | ||
| jobs: | ||
| code-quality: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: "3.10" | ||
| - name: Lint with flake8 | ||
| run: | | ||
| pip install flake8 | ||
| flake8 rpy2_arrow --count --max-complexity=10 --max-line-length=127 --statistics | ||
| build: | ||
| runs-on: ${{ matrix.os }} | ||
| strategy: | ||
| max-parallel: 4 | ||
| matrix: | ||
| python-version: [3.8, 3.9, "3.10", "3.11" ,"3.12"] | ||
| r-version: ['4.3', '4.4'] | ||
| os: [ubuntu-22.04, ubuntu-latest, macOS-latest] | ||
| include: | ||
| - os: ubuntu-22.04 | ||
| SYSTEM_DEPS: sudo apt-get install -y libcurl4-gnutls-dev | ||
| - os: ubuntu-latest | ||
| SYSTEM_DEPS: sudo apt-get install -y libcurl4-gnutls-dev | ||
| - os: macOS-latest | ||
| SYSTEM_DEPS: brew install curl | ||
| steps: | ||
| - uses: actions/checkout@v3 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v4 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Set up R ${{ matrix.r-version }} | ||
| uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: ${{ matrix.r-version }} | ||
| - name: Install system dependencies | ||
| run: ${{ matrix.SYSTEM_DEPS }} | ||
| - name: Install R dependencies | ||
| run: | | ||
| install.packages(c("assertthat", "cpp11", "tidyselect", "vctrs", "R6", "purrr", "bit64")) | ||
| Sys.setenv("NOT_CRAN" = "true") | ||
| install.packages("arrow") | ||
| shell: Rscript {0} | ||
| - name: Install R dependency "polars" (MacOS) | ||
| if: startsWith(matrix.os, 'MacOS') | ||
| run: | | ||
| install.packages("nanoarrow") | ||
| install.packages("polars", repos = "https://rpolars.r-universe.dev") | ||
| shell: Rscript {0} | ||
| - name: Install R dependency "polars" (Linux) | ||
| if: startsWith(matrix.os, 'ubuntu') | ||
| run: | | ||
|
Check failure on line 63 in .github/workflows/pythonpackage.yml
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| install.packages("nanoarrow") | ||
| install.packages("polars", repos = "https://rpolars.r-universe.dev/bin/linux/jammy/${{ r-version }}") | ||
| shell: Rscript {0} | ||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install -r requirements.txt | ||
| pip install git+https://github.com/rpy2/rpy2-r6 | ||
| - name: Build package | ||
| run: | | ||
| pip install build | ||
| python -m build | ||
| - name: Install package | ||
| run: | | ||
| pip install $(ls -t1 dist/*.whl | tail -1)'[all]' | ||
| - name: Test with pytest | ||
| run: | | ||
| export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH} | ||
| pip install pytest codecov pytest-cov | ||
| pip install pandas | ||
| pytest --cov rpy2_arrow.pyarrow_rarrow --cov rpy2_arrow.r6b --cov rpy2_arrow.polars rpy2_arrow/tests*.py | ||
