Update pythonpackage.yml #269
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| name: Python package | |
| on: | |
| push: | |
| pull_request: | |
| schedule: | |
| - cron: '0 0 1 * *' | |
| jobs: | |
| code-quality: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: "3.10" | |
| - name: Lint with flake8 | |
| run: | | |
| pip install flake8 | |
| flake8 rpy2_arrow --count --max-complexity=10 --max-line-length=127 --statistics | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| max-parallel: 4 | |
| matrix: | |
| python-version: [3.8, 3.9, "3.10", "3.11" ,"3.12"] | |
| r-version: ['4.3', '4.4'] | |
| os: [ubuntu-22.04, ubuntu-latest, macOS-latest] | |
| include: | |
| - os: ubuntu-22.04 | |
| SYSTEM_DEPS: sudo apt-get install -y libcurl4-gnutls-dev | |
| - os: ubuntu-latest | |
| SYSTEM_DEPS: sudo apt-get install -y libcurl4-gnutls-dev | |
| - os: macOS-latest | |
| SYSTEM_DEPS: brew install curl | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Set up R ${{ matrix.r-version }} | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Install system dependencies | |
| run: ${{ matrix.SYSTEM_DEPS }} | |
| - name: Install R dependencies | |
| run: | | |
| install.packages(c("assertthat", "cpp11", "tidyselect", "vctrs", "R6", "purrr", "bit64")) | |
| Sys.setenv("NOT_CRAN" = "true") | |
| install.packages("arrow") | |
| shell: Rscript {0} | |
| - name: Install R dependency "polars" (MacOS) | |
| if: startsWith(matrix.os, 'MacOS') | |
| run: | | |
| install.packages("nanoarrow") | |
| install.packages("polars", repos = "https://rpolars.r-universe.dev") | |
| shell: Rscript {0} | |
| - name: Install R dependency "polars" (Linux) | |
| if: startsWith(matrix.os, 'ubuntu') | |
| run: | | |
| install.packages("nanoarrow") | |
| Sys.setenv(NOT_CRAN = "true") | |
| install.packages("polars", repos = "https://community.r-multiverse.org") | |
| shell: Rscript {0} | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install -r requirements.txt | |
| pip install git+https://github.com/rpy2/rpy2-r6 | |
| - name: Build package | |
| run: | | |
| pip install build | |
| python -m build | |
| - name: Install package | |
| run: | | |
| pip install $(ls -t1 dist/*.whl | tail -1)'[all]' | |
| - name: Test with pytest | |
| run: | | |
| export LD_LIBRARY_PATH=$(python -m rpy2.situation LD_LIBRARY_PATH):${LD_LIBRARY_PATH} | |
| pip install pytest codecov pytest-cov | |
| pip install pandas | |
| pytest --cov rpy2_arrow.pyarrow_rarrow --cov rpy2_arrow.r6b --cov rpy2_arrow.polars rpy2_arrow/tests*.py |