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What is POTAGE?

POTAGE (pronounced "pəʊˈtɑːʒ") is a web-based tool for integrating genetic map location with gene expression data and inferred functional annotation in wheat.

POTAGE Web Server

You can access the public POTAGE web server (http://crobiad.agwine.adelaide.edu.au/potage) which contains a limited number of published gene expression data sets.

  1. IWGSC RNA-Seq tissue series
  2. Meiose

Running POTAGE locally

You may be interested in running your own POTAGE server if you:

  1. Need to add additional unpublished data sets.
  2. Would prefer not to use our public server (http://crobiad.agwine.adelaide.edu.au/potage).

To facilitate this option we have packaged up POTAGE into a Docker image. In order to use this image you will need to:

  1. Install Docker Engine for your operating system.
  2. Run the crobiad/potage image.

For full details about running the crobiad/potage image, please see the crobiad/potage repository on Docker Hub.