- R
- Statistics
- Git
- Web3
- Scholarship
- Communication
- Security and Privacy
- Mixed Reality
- Graphics and Design
- Podcasting
- Streaming
- Fun
- License
I’ll do my best to keep this organized but I apologize if it’s perhaps a little untidy. If you feel like something should be added, go ahead and do a pull request and I’ll check it out. You may find the occasional affiliate link.
Anything related to the R language, specifically.
- Live Updates and Bloggers from Data Science Community | RWeekly.org - Blogs to Learn R from the Community
- arisp99/RTidbits: GitHub repository to store various tricks and tips for R
- Tips and tricks in RStudio and R Markdown - Stats and R
- An Introduction to R
- r-assist/assignr: Tools for Educators Writing Assignments in RMarkdown
- A dive into R Markdown | Computing for the Social Sciences
-
Feed me back now: Tales of automated feedback in R and Python | feed-me-back
-
rfordatascience/tidytuesday: Official repo for the #tidytuesday project
- (This isn’t instructive, per se, but it’s a great resource for seeing just how others work.)
-
Tidymodels: tidy machine learning in R
- (A great walkthrough using
tidymodels.)
- (A great walkthrough using
-
The Mockup Blog: Displaying verbatim code chunks in RMarkdown and Xaringan presentations
-
koncina/unilur: A rmarkdown template to create tutorials/practicals or examination papers.
-
r-assist/assignr: Tools for Educators Writing Assignments in RMarkdown
-
Acronyms and Glossaries Support for RMarkdown • acronymsdown
- DesiQuintans/librarian: Install, Update, Load Packages from CRAN, Bioconductor, and GitHub in One Step
- tidyverse/reprex: Render bits of R code for sharing, e.g., on GitHub or StackOverflow.
- mwip/beautifyR: RStudio addin for formatting Rmarkdown tables
- swsoyee/pagemapR: 📦 Quickly and easily add a mini map to web page
- Download Qualtrics Survey Data • rOpenSci: qualtRics
- dreamRs/shinyWidgets: shinyWidgets : Extend widgets available in shiny
- r-lib/waldo: Find differences between R objects
- HTML Metadata Tags for R Markdown and Shiny • metathis
- R-CoderDotCom/calendR: Ready to print calendars with ggplot2
- yonicd/details: R Package to Create Details HTML Tag for Markdown and Package Documentation
- emitanaka/edibble: An R-package to construct designs using the grammar of experimental design
- MilesMcBain/datapasta: On top of spaghetti, all covered in cheese….
- Call R from R • callr
- stla/findInFiles: Find a pattern in some files.
- progressr 0.8.0: RStudio’s progress bar, Shiny progress updates, and absolute progress
- Extract text from pdf in R and word Detection » finnstats
- ConviviaR Tools: Post-Publication Collecting ORCIDs for the Authors
- rorcid introduction • rorcid
- yonicd/details: R Package to Create Details HTML Tag for Markdown and Package Documentation
- ConviviaR Tools: Importing Author Information from CrossRef to Wikidata via QuickStatements
- Generate QRcodes with R • qrcode
- Data Visualization with R
- This provides a variety of visualization suggestions depending on what number and types of variables you’re working with.
- dokato/todor: TODOr - RStudio add-in for finding TODO, FIXME, CHANGED
etc. comments in your code.
- Amazingly useful if you use comments in your code/markdown/project as notes-to-self.
- JohnCoene/countup: ⏱️ countup.js R htmlwidget
- swsoyee/pagemapR: 📦 Quickly and easily add a mini map to web page
- GuangchuangYu/hexSticker: Hexagon sticker in R
- GuangchuangYu/badger: Badge for R Package
- yonicd/glossaries: glossary functionality for Rmarkdown documents
- njtierney/syn: syn - the thesaurus
- tholman/github-corners: A fresher “Fork me on GitHub” callout.
- GitHub - gaborcsardi/prompt: Dynamic R prompt
- Interpreted String Literals • glue
- gadenbuie/epoxy: Extra-strength glue engines for R Markdown and Quarto
- deepanshu88/summaryBox: Value and Info Boxes in Shiny Apps and Rmarkdown (Bootstrap 4)
- dlab-berkeley/RStudio-Project-Management: Resources to help you start managing data science projects.
- A Framework for Reproducible and Collaborative Data Science • workflowr
- Reproducible Research Data and Project Management in R
- GitHub workflow for data science project
proposals
- Related to IDS and Welcome | Data Science in a Box
- RealityBending/TemplateResults: A template for a data analysis folder that can be easily exported as a webpage or as Supplementary Materials
- startyourlab/r-project-template: A template to start R projects with R Studio, using version control via Git and GitHub by default.
- svmiller/codename: Codename Generation for Organizations, People, Projects, and Whatever Else
- My easy R script header template – Tim Farewell
- jrcalabrese/tablecloth: An R package to create and format APA-style tables.
- schochastics/rtoot: R package to interact with the mastodon API
- nmfs-opensci/quarto-thesis: Quarto extension for a masters or PhD thesis
- sellorm/quarto-social-embeds: A Quarto extension to embed social media content
- Simulating color-vision deficiency- RPubs - quarto-cvd-widget
- 6 Productivity Hacks for Quarto - RStudio
- Quarto - Get Started
- Not RMarkdown, specifically, but a related method of writing that I’m really enjoying.
- papaja: Reproducible APA manuscripts with R Markdown
- A rmarkdown Template that Can be Highly Customized • memor
- GerkeLab/betterposter: Another R Markdown Better Scientific Poster
- Introducing the flipdownr package. Create a CountDown in Rmarkdown Documents and Shiny Apps | Mohamed El Fodil IHADDADEN
- feddelegrand7/GomoGomonoMi: 👑 Animate Text in Rmd documents and shiny using the Animate.css Library
- R Markdown Template for Responses to Reviewers • respondR
- rstudio/rticles: LaTeX Journal Article Templates for R Markdown
- dpprdan/rmdwiki: Wiki Markup Output Formats and Templates for RMarkdown
- deepanshu88/summaryBox: Value and Info Boxes in Shiny Apps and Rmarkdown (Bootstrap 4)
- Inserting pages from an external PDF document within a LaTeX
document
- (This works in RMarkdown files.)
- Getting Started with R Markdown
- Embed Video in HTML • vembedr
- dreamRs/gfonts: Offline Google Fonts for rmarkdown and shiny
- eddelbuettel/linl: Linl Is Not Letter – Markdown-based LaTeX Letter Template
- Another Academic R Markdown Article/Manuscript Template | Steven V. Miller
- cynkra/indiedown: Individual RMarkdown Templates
- carpentries/glosario: A multilingual glossary package.
- Is Your Code Ready for Publication? A Practical Guide to R Markdown
- rchaput/acronymsdown: Adds support for List of Acronyms to RMarkdown documents (rmarkdown, bookdown, pagedown, …).
- Toniiiio/imageclipr: RStudio Addin: Copy Image from Clipboard into RMarkdown .Rmd file
- oniani/docprep: Various templates for document preparation purposes
- sebastiansauer/yart: RMarkdown Template for writing PDF reports
- cynkra/indiedown: Individual RMarkdown Templates
- agricolamz/checkdown: R package for Rmarkdown for creating autocheck questions and hints
- R Markdown Lesser-Known Tips & Tricks #2: Cleaning Up Your Code - RStudio
- GitHub - gadenbuie/tweetrmd: Embed Tweets in R Markdown
- Changing fonts in RMarkdown PDFs | Cecina Babich Morrow
- Font typefaces - Overleaf, Online LaTeX
Editor
- This is a list of fonts to use in YAML as per above.
- jumpingrivers/namer: R package for labelling chunks of RMarkdown files!
- Toniiiio/imageclipr: RStudio Addin: Copy Image from Clipboard into RMarkdown .Rmd file
Tables, figures, EDA, et cetera.
- htmlwidgets for R - gallery
- Introduction to metricsgraphics
- rstudio/r2d3: R Interface to D3 Visualizations
- davidgohel/flextable: table farming
- arthurwelle/codehover: Hoverable HTML Table for Displaying Intermediary Code Results (e.g. Pipes)
- erikgahner/awesome-ggplot2: A curated list of awesome ggplot2
tutorials, packages
etc.
- (A huge, truly awesome list.)
- Axes (ggplot2)
- Graphics in R with ggplot2 - Stats and R
- rolkra/explore: R package that makes basic data exploration radically simple (interactive data exploration, reproducible data science)
- feddelegrand7/cronologia: 🌱 🌱 🌱 Create an HTML Vertical Timeline Widget in RMarkdown and Shiny
- rstudio/gt: Easily generate information-rich, publication-quality tables from R
- Collapsible Tree: Geography Example
- slickR Basics
- Make ggplot2 Graphics Interactive • ggiraph package
- daattali/timevis: 📅 Create interactive timeline visualizations in R
- Easily Arrange External Figures with Patchwork Alongside ggplot2 Figures • figpatch
- kassambara/ggpubr: ‘ggplot2’ Based Publication Ready Plots
- BBC Visual and Data Journalism cookbook for R graphics
- Some minimal examples • mmtable2
- Exploring Histograms
- GitHub - ddsjoberg/gtsummary: Presentation-Ready Data Summary and Analytic Result Tables
- marinebon/infographiqR: R functions for creation of interactive intelligent infographics, ie infographiq
- Discovering Statistics – The adventure begins …
- homepage | Stats Video Textbook
- Stats and R
- Statistics glossary - Google Docs
- yuzaR-Blog: Correlation Analysis in R | Pearson, Spearman, Robust, Bayesian | How to conduct, visualise and interpret
- Bayesian power analysis: Part I. Prepare to reject $H_0$ with simulation. | A. Solomon Kurz
- Bayesian Statistics Explained in Simple English For Beginners
- Tidy t-Tests with infer • infer
- psych252/psych252slides:
Slides
- This repository contains the slides and RMarkdown notes for the course “Psych 252: Statistical methods for the behavioral and social sciences” taught by Tobias Gerstenberg at Stanford University.
- Bayesian Data Analysis course | bookdown
- Marginal Effects, Marginal Means, Predictions, and Contrasts • marginaleffects
- Test for Normal Distribution in R-Quick Guide - Data Science Tutorials
- Research at Web3 Foundation — Research at W3F
- Ethereum Foundation & community grant programs | ethereum.org
- Web3 is going just great
- Tech Trends in Higher Ed: Metaverse, NFT and DAO - UPCEA
- Web3’s Impact on Higher Education - Grant’s Writing
- Crypto, Culture, & Society
- Paradigm – Medium
- Coin University - Decentralized Crypto Learning Platform
- Nontechnical Explanation of DeFi Components, Understanding & Using Decentralized Exchanges — The Cronicle Level Three Education – The Cronicle – Crypto.com & Cronos News
- Introducing Worldcoin
- Proof Of Humanity
- Decentralized Society: Finding Web3’s Soul by E. Glen Weyl, Puja Ohlhaver, Vitalik Buterin :: SSRN
- Mint a Token (unbacked) on xDai in 5 minutes - Gnosis Chain
- How to Create a Cryptocurrency (Token) Without a Single Line of Code 💰
- Create MRC20 Token - CoinTool.App
- Resources — edChain
- We Are Getting Dumber: Can Decentralized Education Make Us Smarter Again? - BeInCrypto
- Could Crypto Kill College?
- Why Bitcoiners Are Turning to Unschooling for Decentralized Education – Op-Ed Bitcoin News
- It’s Time to Decentralize College: How to Make Higher Education Great Again Using Blockchain | HackerNoon
- The Rise of Crypto in Higher Education - BlockSocial
- Universities Are Flunking Blockchain Tech
- Blockchain, Cryptocurrency (like Bitcoin), and Higher Education – Sovorel
- An Investigation into the use of Non-Fungible Tokens on College Campuses | by Jake DiBattista | Coinmonks | Jun, 2022 | Medium
- Ed3 DAO & Ed3 Educators Events
- A beginner’s guide to DAOs — Mirror
- DAO Aims to Fund Cryptocurrency Projects by University Students
- Universities to Build Blockchain DAO for Affordable Education - CoinDesk
- Edu DAO
- What is a DAO? – DAO Central
- Discover, contribute and earn at DAO
- Why use a DAO for Crypto Education? | by Joel | BaconDAO | Medium
- Cryptocurrency and the Nonprofit: A Beginner’s Guide - BWF
- Potential Legal Frameworks for DAOs — FinTech BitBlog
- DAO: What is it? What does it mean for nonprofits? – Nonprofit Law Blog
General scholarship content, like research advice, how to cite, find funding opportunities, and so on.
- Tips on Getting Tenure—From Those Who’ve Done It
- Insiders’ tactics for securing tenure
- Tips for success on your path to tenure
- How to do Graduate Research, Some Advice
- 8 Finding a Topic and Beginning Research
- Comprehensive Academic Workflow from Reading to Writing in Markdown
- colearendt/gitlink: An R package to simplify placing GitHub links in your Shiny applications and R Markdown documents
- GitHub - KaleabTessera/Research-Paper-Reading-Template: A markdown template for taking notes to summarize research papers.
- Science Topics - Terms, Concepts & Definitions | ScienceDirect
- How to Design Your Own Personal Knowledge Management System — Martine Ellis
- Create Your Summer Writing Plan in 3 Steps
- The Four Cornerstones to Writing More: Write with Focus - cathy mazak
Obsidian is a markdown-focused notetaking application that means to serve as a “second brain,” more or less.
- marcusolsson/obsidian-projects: Project management for Obsidian
- How to create Indexes & Citation notes - Resolved help - Obsidian Forum
- platers/obsidian-linter: An Obsidian plugin that enforces consistent markdown styling
- George-debug/obsidian-timeline: Obisdian.md plugin for creating timelines
- zsviczian/obsidian-excalidraw-plugin: A plugin to edit and view Excalidraw drawings in Obsidian
- My Tech Toolkit for Academic Research and Study — Martine Ellis
- How I Use Obsidian for Note-Taking and Note-Making — Martine Ellis
- A set a periodic note templates for Obsidian.md
- liamcain/obsidian-lapel: 🤵 Dress up your editor. Obsidian plugin to show the heading level in the gutter.
- IdreesInc/Waypoint: Obsidian plugin that gives you the power to generate dynamic MOCs in your folder notes. Enables folders to show up in the graph view and removes the need for messy tags!
- My Obsidian Daily Note is Growing Up! | Produclivity
And for fun:
- DUNGEONS & DRAGONS (D&D)… Knowledge management - Obsidian Forum
- valentine195/obsidian-5e-statblocks: Create Dungeons and Dragons style statblocks for Obsidian.md
- The PARA Method: A Universal System for Organizing Digital Information - Forte Labs
- Create a dynamic dashboard with R, flexdashboard, and Shiny | Andrew
Heiss
- (The successor to the original dashboard to show the status of the pipeline, based on Matt Lebo’s “Managing Your Research Pipeline”.)
- Documenting your projects on GitHub · GitHub Guides
- Go beyond Bookmarks with BrainTool, the online Topic Manager | BrainTool - Beyond Bookmarks
- GitHub - mindymallory/research-project-template: This template can be used to begin projects that are reproducible from raw data through published paper or thesis.
- An R Markdown Approach to Academic Workflow for the Social Sciences | Steven V. Miller
- papaja: Reproducible APA manuscripts with R
Markdown
- (It’s important enough that it’s here and in the R section.)
- Reference List: Author/Authors // Purdue Writing Lab
- APA Style 7th ed. Numbers and Statistics guide
- What a $500,000 grant proposal looks like - Austin Z. Henley
- How to Nail Broader Impacts in Your Next NSF Grant Application
- how-to-write-a-winning-nsf-proposal.pdf
- Example of accepted NSF proposal
- Another funded NSF proposal from Sample NSF Proposals | John Bunce
- TysonStanley/biosketchr: An R package built on RMarkdown to create biosketches (e.g. for NIH)
- Lessons from serving on NSF panels | Small Pond Science
- Advice on Writing Proposals - particularly to NSF
- Ten simple rules for writing a response to
reviewers
- (Related to
respondR)
- (Related to
- PrivacyTools - Encryption Against Global Mass
Surveillance
- (Big collection of privacy tools ranging from providers, browsers, software, operating systems, and more.)
- Sign Git Commits With A Keybase GPG Key – Stephen’s Thoughts
- ExifCleaner - FREE Desktop app to clean image metadata
- Pixelfed - Federated Image Sharing
- (Privacy-focused, federalized Instagram replacement.)
- Giving social networking back to you - Mastodon
- jivoi/awesome-ml-for-cybersecurity: Machine Learning for Cyber Security
- canton7/SyncTrayzor: Windows tray utility / filesystem watcher / launcher for Syncthing
- 🧅 OnionShare
- (“an open source tool that lets you securely and anonymously share files, host websites, and chat with friends using the Tor network.”)
- CryptPad: Collaboration suite, encrypted and
open-source
- (Has fully encrypted alternatives for Google Drive, surveys, Slack teams, and so on.)
- Turtl: The secure, collaborative notebook |
Turtl
- (Can be used to save bookmarks and whatnot with the browser extension.)
- Matterport: Capture, share, and collaborate the built world in immersive 3D
- Build mixed reality digital twins with Azure Digital Twins and Unity - Learn | Microsoft Docs
- Volumetric Video Capture Booth | Capture HD Static & Dynamic 3D Models
- Home | XR Access Initiative
- Making VR a Reality in the Classroom | EDUCAUSE
- Make Images, Videos and Web Stories for Free in Minutes | Adobe Spark
- Stock photos, royalty-free images, graphics, vectors & videos | Adobe Stock
- Canva: Collaborate & Create Amazing Graphic Design for Free
- Beautiful Free Images & Pictures | Unsplash
- Artlist - Royaly Free Music Licensing For VideosMusic Licensing For Video
- Krita | Digital Painting. Creative Freedom.
- Simple Icons | 1965 Free SVG icons for popular brands
- Browse Your Life in Pictures – PhotoPrism
- Privately hosted, open source photo organization tool (think Google Photos but local).
- DEVICON | All programming languages and development tools related icons font
- Excalidraw: Virtual whiteboard for sketching hand-drawn like diagrams. Collaborative and end-to-end encrypted.
- Twine + email integration? : twinegames
- SugarCube - Twine Cookbook
- New to Twine, how do I make a text box or input text? - Twine Forum
- Question about functionality : twinegames
- Making game remember player’s chosen name : twinegames
- Twine Game Data to Google Sheets via Javascript version 2 - John Stewart
- Text box prompt - Twine Forum
- Twine 2 Tutorial: Getting the Player’s Name
- A Total Beginner’s Guide to Twine 2.1 – Adam Hammond
(Note that OBS Studio is the standard. The Streamlabs OBS links below are good for beginners. You may or may not want to use Streamlabs depending on how you feel about their business practices. OBS Studio is free and open source.)
- The Essential Toolkit for Pro Streamers | Streamlabs Prime
- How to Live Stream Your Classroom for Teachers | Streamlabs
- How to Record on Streamlabs OBS (Best Settings for 2021) | by Ethan May | Streamlabs Blog | Streamlabs Blog
- How to Stream VR Games With Streamlabs | Streamlabs
This
work is licensed under a
Creative
Commons Attribution 4.0 International License.
