refactor: migrate all blarignore/blarify references to cueignore/cue

.coveragerc

@@ -1,5 +1,5 @@
 [run]
-source = blarify
+source = cue
 omit = 
     */tests/*
     */test_*

.github/workflows/tests.yml

@@ -70,16 +70,16 @@ jobs:
 
     - name: Run linting
       run: |
-        poetry run ruff check blarify/ || true
-        poetry run ruff format --check blarify/ || true
+        poetry run ruff check cue/ || true
+        poetry run ruff format --check cue/ || true
 
     - name: Run type checking with pyright
       run: |
-        poetry run pyright blarify/graph/graph.py || echo "Type checking in progress - some modules still need type annotations"
+        poetry run pyright cue/graph/graph.py || echo "Type checking in progress - some modules still need type annotations"
 
     - name: Run legacy mypy check (transitional)
       run: |
-        poetry run mypy blarify/ --ignore-missing-imports || echo "MyPy check - transitioning to pyright"
+        poetry run mypy cue/ --ignore-missing-imports || echo "MyPy check - transitioning to pyright"
 
     - name: Run tests with coverage
       env:
@@ -159,7 +159,7 @@ jobs:
         poetry run python -m pytest tests/test_integration*.py -v || echo "Integration tests need work"
 
         # Run MCP server tests if they exist
-        if [ -d "mcp-blarify-server/tests" ]; then
-          cd mcp-blarify-server
+        if [ -d "mcp-cue-server/tests" ]; then
+          cd mcp-cue-server
           poetry run python -m pytest tests/ -v || echo "MCP tests need work"
         fi

.gitignore

@@ -1,5 +1,5 @@
 
-# dont ignore anything in blarify/vendor
+# dont ignore anything in cue/vendor
 
 __pycache__/
 .venv/
@@ -18,7 +18,7 @@ static/
 easy/
 
 
-!blarify/vendor/**/*.json
+!cue/vendor/**/*.json
 !.claude/settings.json
 !pyrightconfig.json
 

PYRIGHT_DEVELOPER_GUIDE.md

@@ -51,16 +51,16 @@ For optimal development experience, install the Pylance extension:
 
 ```bash
 # Check entire codebase
-poetry run pyright blarify/
+poetry run pyright cue/
 
 # Check specific file
-poetry run pyright blarify/graph/graph.py
+poetry run pyright cue/graph/graph.py
 
 # Check with statistics
-poetry run pyright blarify/ --stats
+poetry run pyright cue/ --stats
 
 # Generate JSON output for CI
-poetry run pyright blarify/ --outputjson
+poetry run pyright cue/ --outputjson
 ```
 
 ### Development Workflow
@@ -70,7 +70,7 @@ poetry run pyright blarify/ --outputjson
 poetry run pyright <file_you_modified>
 
 # Full validation before commit
-poetry run pyright blarify/
+poetry run pyright cue/
 ```
 
 ## Type Annotation Guidelines
@@ -134,7 +134,7 @@ For circular imports, use the TYPE_CHECKING pattern:
 from typing import TYPE_CHECKING
 
 if TYPE_CHECKING:
-    from blarify.graph.relationship import Relationship
+    from cue.graph.relationship import Relationship
 
 class Node:
     def get_relationships(self) -> List["Relationship"]:
@@ -170,23 +170,23 @@ def as_object(self) -> Dict[str, Any]:
 
 ### ✅ Fully Typed Modules
 
-- `blarify/graph/graph.py` - **Zero pyright errors**
-- `blarify/graph/node/types/node.py` - Basic typing complete
-- `blarify/graph/relationship/relationship.py` - Basic typing complete
+- `cue/graph/graph.py` - **Zero pyright errors**
+- `cue/graph/node/types/node.py` - Basic typing complete
+- `cue/graph/relationship/relationship.py` - Basic typing complete
 
 ### 🔄 In Progress
 
-- `blarify/graph/node/` - Node hierarchy (175 errors)
+- `cue/graph/node/` - Node hierarchy (175 errors)
 - Import cycle resolution across modules
 - Optional type parameter fixes
 
 ### ⏳ Pending
 
-- Database managers (`blarify/db_managers/`)
-- LSP integration (`blarify/code_references/`)
-- Language processing (`blarify/code_hierarchy/`)
-- LLM integration (`blarify/llm_descriptions/`)
-- File system operations (`blarify/project_file_explorer/`)
+- Database managers (`cue/db_managers/`)
+- LSP integration (`cue/code_references/`)
+- Language processing (`cue/code_hierarchy/`)
+- LLM integration (`cue/llm_descriptions/`)
+- File system operations (`cue/project_file_explorer/`)
 - Test files (`tests/`)
 
 ## Error Categories and Solutions
@@ -281,15 +281,15 @@ The project uses gradual adoption:
 ```yaml
 - name: Run type checking with pyright
   run: |
-    poetry run pyright blarify/graph/graph.py || echo "Type checking in progress"
+    poetry run pyright cue/graph/graph.py || echo "Type checking in progress"
 ```
 
 ### Future Pipeline (Target)
 
 ```yaml
 - name: Run type checking
   run: |
-    poetry run pyright blarify/
+    poetry run pyright cue/
 ```
 
 ## Contributing

README.md

@@ -16,18 +16,18 @@ Blarify supports the following languages out of the box:
 - C#
 - PHP
 
-**Note**: Blarify is designed to be robust. If a language parser is not installed or fails to load, Blarify will continue to work for other supported languages, displaying a warning for the missing language support. See [Language Support Documentation](blarify/LANGUAGE_SUPPORT.md) for more details.
+**Note**: Blarify is designed to be robust. If a language parser is not installed or fails to load, Blarify will continue to work for other supported languages, displaying a warning for the missing language support. See [Language Support Documentation](cue/LANGUAGE_SUPPORT.md) for more details.
 
 # Example
 
-<img src="https://raw.githubusercontent.com/blarApp/blarify/refs/heads/main/docs/visualisation.png"></img>
+<img src="https://raw.githubusercontent.com/blarApp/cue/refs/heads/main/docs/visualisation.png"></img>
 This graph was generated from the code in this repository.
 
 # Quickstart
 
-Get started with blarify by following our quickstart guide:
+Get started with cue by following our quickstart guide:
 
-[➡️ Quickstart Guide](https://github.com/blarApp/blarify/blob/main/docs/quickstart.md)
+[➡️ Quickstart Guide](https://github.com/blarApp/cue/blob/main/docs/quickstart.md)
 
 # Article
 
@@ -41,7 +41,7 @@ Read our article on Medium to learn more about the motivation behind this projec
 - **Multi-Language Support**: Supports Python, JavaScript, TypeScript, Ruby, Go, C#, PHP, and Java
 - **LLM-Generated Descriptions** (New!): Optionally generate natural language descriptions for code elements using Azure OpenAI
 - **Documentation Knowledge Graph** (New!): Parse documentation files to extract concepts, entities, and automatically link them to relevant code
-- **Gitignore Integration** (New!): Automatically excludes files matching `.gitignore` patterns, with `.blarignore` for additional exclusions
+- **Gitignore Integration** (New!): Automatically excludes files matching `.gitignore` patterns, with `.cueignore` for additional exclusions
 - **Graph Database Integration**: Export to Neo4j or FalkorDB for visualization and querying
 - **Incremental Updates**: Efficiently update the graph when code changes
 
@@ -75,7 +75,7 @@ Blarify now automatically respects your `.gitignore` patterns, ensuring that ver
 ## How it works
 
 - **Automatic `.gitignore` support**: All patterns in `.gitignore` files are automatically applied
-- **`.blarignore` for additional exclusions**: Create a `.blarignore` file for Blarify-specific exclusions
+- **`.cueignore` for additional exclusions**: Create a `.cueignore` file for Blarify-specific exclusions
 - **Nested `.gitignore` files**: Supports `.gitignore` files in subdirectories
 - **Full pattern syntax**: Supports all gitignore patterns including globs, directory markers, and comments
 
@@ -94,16 +94,16 @@ graph_builder = GraphBuilder(
     use_gitignore=False
 )
 
-# Specify custom .blarignore path
+# Specify custom .cueignore path
 graph_builder = GraphBuilder(
     root_path="/path/to/project",
-    blarignore_path="/path/to/.blarignore"
+    cueignore_path="/path/to/.cueignore"
 )
 ```
 
-## .blarignore Example
+## .cueignore Example
 
-Create a `.blarignore` file in your project root:
+Create a `.cueignore` file in your project root:
 
 ```
 # Exclude test files