BioJS Human Genetic Variation Viewer

BioJS Component for visualising human gentic variations, GSoC2014

New Version

BioJS2 version here: https://github.com/saketkc/biojs-vis-hgv

Working Demo

http://saketkc.github.io/biojs-genetic-variation-viewer/

Blog

http://genetic-variation-viewer-biojs.blogspot.com/

Cite

Choudhary, S., Garcia, L., Nightingale, A., & Martin, M. J. (2015). BioJS-HGV Viewer: Genetic Variation Visualizer. bioRxiv, 032573.

pdf

Known Issues

1. It’s slooooow!
2. Categories checkboxes[Benign/Damaging/Mixed] do not update when zooming in or zooming out
3. Settings icon is invisible on Windows/Android etc. etc.

Screenshots

Closed view(Default)


Closed view with Zoom


Open view without Zoom


Open view with Zoom


Hide Benign Mutations in Zoomed view


Use only SIFT scores for calculating class of mutation