This is a simple set of Python scripts to test IMP applications on a compute cluster, and to deposit those test results into a database that can be seen at https://integrativemodeling.org/systems/.

For the frontend for the website, see https://github.com/salilab/systems-web/.

Configuration

Copy the file config.yaml.in to config.yaml and fill in the necessary paths, machine names, and credentials.

Usage

1. To start tests of IMP applications, run test.py on the compute cluster headnode, giving as arguments the IMP branch and git hash to test with. This will create a directory with subdirectories for each application, and submit jobs to the cluster.
2. To check on the jobs and collect test results, run test.py with no arguments in the directory that was created above. This will place test results in a Python pickle file.
3. Run test.py with the path to the pickle file, on the machine running the MySQL database, to deposit test results into the database.