Merge pull request #1058 from samply/release-v0.22.1

Release v0.22.1

.clj-kondo/config.edn

@@ -1,5 +1,5 @@
 {:lint-as
- {blaze.test-util/with-system clojure.core/with-open}
+ {blaze.module.test-util/with-system clojure.core/with-open}
 
  :linters
  {:unsorted-required-namespaces

.github/scripts/authenticated-request.sh

@@ -10,15 +10,15 @@ fi
 BASE="http://localhost:8080/fhir"
 
 if [ "200" = "$(curl -s --oauth2-bearer "$ACCESS_TOKEN" -o /dev/null -w '%{response_code}' "$BASE")" ]; then
-  echo "OK: successful authenticated system search request"
+  echo "OK 👍: successful authenticated system search request"
 else
-  echo "Fail: failed authenticated system search request"
+  echo "Fail 😞: failed authenticated system search request"
   exit 1
 fi
 
 if [ "200" = "$(curl -s --oauth2-bearer "$ACCESS_TOKEN" -H "Content-Type: application/fhir+json" -d @.github/openid-auth-test/batch-bundle.json "$BASE" | jq -r '.entry[].response.status')" ]; then
-  echo "OK: successful authenticated batch request"
+  echo "OK 👍: successful authenticated batch request"
 else
-  echo "Fail: failed authenticated batch request"
+  echo "Fail 😞: failed authenticated batch request"
   exit 1
 fi

.github/scripts/batch-metadata.sh

@@ -26,32 +26,32 @@ RESULT=$(curl -sH "Content-Type: application/fhir+json" -d "$(bundle)" "$BASE")
 
 RESOURCE_TYPE="$(echo "$RESULT" | jq -r .resourceType)"
 if [ "$RESOURCE_TYPE" = "Bundle" ]; then
-  echo "OK: the resource type is Bundle"
+  echo "OK 👍: the resource type is Bundle"
 else
-  echo "Fail: the resource type is $RESOURCE_TYPE, expected Bundle"
+  echo "Fail 😞: the resource type is $RESOURCE_TYPE, expected Bundle"
   exit 1
 fi
 
 BUNDLE_TYPE="$(echo "$RESULT" | jq -r .type)"
 if [ "$BUNDLE_TYPE" = "batch-response" ]; then
-  echo "OK: the bundle type is batch-response"
+  echo "OK 👍: the bundle type is batch-response"
 else
-  echo "Fail: the bundle type is $BUNDLE_TYPE, expected batch-response"
+  echo "Fail 😞: the bundle type is $BUNDLE_TYPE, expected batch-response"
   exit 1
 fi
 
 RESPONSE_STATUS="$(echo "$RESULT" | jq -r .entry[].response.status)"
 if [ "$RESPONSE_STATUS" = "200" ]; then
-  echo "OK: the response status is 200"
+  echo "OK 👍: the response status is 200"
 else
-  echo "Fail: the response status is $RESPONSE_STATUS, expected 200"
+  echo "Fail 😞: the response status is $RESPONSE_STATUS, expected 200"
   exit 1
 fi
 
 RESPONSE_RESOURCE_TYPE="$(echo "$RESULT" | jq -r .entry[].resource.resourceType)"
 if [ "$RESPONSE_RESOURCE_TYPE" = "CapabilityStatement" ]; then
-  echo "OK: resource type is CapabilityStatement"
+  echo "OK 👍: resource type is CapabilityStatement"
 else
-  echo "Fail: resource type was $RESPONSE_RESOURCE_TYPE but should be CapabilityStatement"
+  echo "Fail 😞: resource type was $RESPONSE_RESOURCE_TYPE but should be CapabilityStatement"
   exit 1
 fi

.github/scripts/batch.sh

@@ -29,32 +29,32 @@ RESULT=$(curl -sH "Content-Type: application/fhir+json" -d "$(bundle)" "$BASE")
 
 RESOURCE_TYPE="$(echo "$RESULT" | jq -r .resourceType)"
 if [ "$RESOURCE_TYPE" = "Bundle" ]; then
-  echo "OK: the resource type is Bundle"
+  echo "OK 👍: the resource type is Bundle"
 else
-  echo "Fail: the resource type is $RESOURCE_TYPE, expected Bundle"
+  echo "Fail 😞: the resource type is $RESOURCE_TYPE, expected Bundle"
   exit 1
 fi
 
 BUNDLE_TYPE="$(echo "$RESULT" | jq -r .type)"
 if [ "$BUNDLE_TYPE" = "batch-response" ]; then
-  echo "OK: the bundle type is batch-response"
+  echo "OK 👍: the bundle type is batch-response"
 else
-  echo "Fail: the bundle type is $BUNDLE_TYPE, expected batch-response"
+  echo "Fail 😞: the bundle type is $BUNDLE_TYPE, expected batch-response"
   exit 1
 fi
 
 RESPONSE_STATUS="$(echo "$RESULT" | jq -r .entry[].response.status)"
 if [ "$RESPONSE_STATUS" = "200" ]; then
-  echo "OK: the response status is 200"
+  echo "OK 👍: the response status is 200"
 else
-  echo "Fail: the response status is $RESPONSE_STATUS, expected 200"
+  echo "Fail 😞: the response status is $RESPONSE_STATUS, expected 200"
   exit 1
 fi
 
 RESPONSE_PATIENT_ID="$(echo "$RESULT" | jq -r .entry[].resource.id)"
 if [ "$RESPONSE_PATIENT_ID" = "$PATIENT_ID" ]; then
-  echo "OK: patient id's match"
+  echo "OK 👍: patient id's match"
 else
-  echo "Fail: response patient id was $RESPONSE_PATIENT_ID but should be $PATIENT_ID"
+  echo "Fail 😞: response patient id was $RESPONSE_PATIENT_ID but should be $PATIENT_ID"
   exit 1
 fi

.github/scripts/chaining-without-referential-integrity.sh

@@ -8,8 +8,8 @@ curl -sXPUT -d '{"resourceType" : "Patient", "id": "0", "gender": "male"}' -H 'C
 RESULT="$(curl -sH 'Prefer: handling=strict' -H 'Accept: application/fhir+json' "$BASE/Observation?patient.gender=male&_summary=count" | jq -r '.total')"
 
 if [ "$RESULT" = "1" ]; then
-  echo "Success: chaining works"
+  echo "OK 👍: chaining works"
 else
-  echo "Fail: chaining doesn't work"
+  echo "Fail 😞: chaining doesn't work"
   exit 1
 fi

.github/scripts/check-date-search.sh

@@ -20,7 +20,7 @@ size() {
   if [ "$DOWNLOAD_SIZE" = "$COUNT_SIZE" ]; then
     echo "$DOWNLOAD_SIZE"
   else
-    echo "Fail: the download size is $DOWNLOAD_SIZE, expected $COUNT_SIZE"
+    echo "Fail 😞: the download size is $DOWNLOAD_SIZE, expected $COUNT_SIZE"
     exit 1
   fi
 }

.github/scripts/check-referential-integrity-enforced.sh

@@ -3,8 +3,8 @@
 ENFORCED=$(curl -s http://localhost:8080/fhir/metadata | jq -r 'isempty(.rest[].resource[].referencePolicy[] | select(. == "enforced")) | not')
 
 if [ "true" = "$ENFORCED" ]; then
-  echo "Success"
+  echo "OK 👍"
 else
-  echo "Fail"
+  echo "Fail 😞"
   exit 1
 fi

.github/scripts/check-referential-integrity-not-enforced.sh

@@ -3,8 +3,8 @@
 ENFORCED=$(curl -s http://localhost:8080/fhir/metadata | jq -r 'isempty(.rest[].resource[].referencePolicy[] | select(. == "enforced")) | not')
 
 if [ "false" = "$ENFORCED" ]; then
-  echo "Success"
+  echo "OK 👍"
 else
-  echo "Fail"
+  echo "Fail 😞"
   exit 1
 fi

.github/scripts/conditional-create.sh

@@ -34,18 +34,18 @@ STATUS=$(curl -sH "Content-Type: application/fhir+json" \
   -d "$(bundle)" "$BASE" | jq -r '.entry[].response.status')
 
 if [ "$STATUS" = "201" ]; then
-  echo "OK: first attempt created the Organization"
+  echo "OK 👍: first attempt created the Organization"
 else
-  echo "Fail: status was ${STATUS} but should be 201"
+  echo "Fail 😞: status was ${STATUS} but should be 201"
   exit 1
 fi
 
 STATUS=$(curl -sH "Content-Type: application/fhir+json" \
   -d "$(bundle)" "$BASE" | jq -r '.entry[].response.status')
 
 if [ "$STATUS" = "200" ]; then
-  echo "OK: second attempt returned the already created Organization"
+  echo "OK 👍: second attempt returned the already created Organization"
 else
-  echo "Fail: status was ${STATUS} but should be 200"
+  echo "Fail 😞: status was ${STATUS} but should be 200"
   exit 1
 fi

.github/scripts/delete.sh

@@ -8,42 +8,42 @@ PATIENT_HISTORY=$(curl -s "$BASE/Patient/$PATIENT_ID/_history")
 
 TOTAL=$(echo "$PATIENT_HISTORY" | jq .total)
 if [ "$TOTAL" = "1" ]; then
-  echo "OK: patient history has one entry"
+  echo "OK 👍: patient history has one entry"
 else
-  echo "Fail: patient history has $TOTAL entries"
+  echo "Fail 😞: patient history has $TOTAL entries"
   exit 1
 fi
 
 METHOD=$(echo "$PATIENT_HISTORY" | jq -r .entry[].request.method)
 if [ "$METHOD" = "DELETE" ]; then
-  echo "OK: patient history entry has method DELETE"
+  echo "OK 👍: patient history entry has method DELETE"
 else
-  echo "Fail: patient history entry has method $METHOD"
+  echo "Fail 😞: patient history entry has method $METHOD"
   exit 1
 fi
 
 STATUS=$(echo "$PATIENT_HISTORY" | jq -r .entry[].response.status)
 if [ "$STATUS" = "204" ]; then
-  echo "OK: patient history entry has status 204"
+  echo "OK 👍: patient history entry has status 204"
 else
-  echo "Fail: patient history entry has status $STATUS"
+  echo "Fail 😞: patient history entry has status $STATUS"
   exit 1
 fi
 
 PATIENT_STATUS=$(curl -is "$BASE/Patient/$PATIENT_ID" | grep HTTP | tr -d '\r\n')
 if [ "$PATIENT_STATUS" = "HTTP/1.1 410 Gone" ]; then
-  echo "OK: patient status is HTTP/1.1 410 Gone"
+  echo "OK 👍: patient status is HTTP/1.1 410 Gone"
 else
-  echo "Fail: patient status is $PATIENT_STATUS"
+  echo "Fail 😞: patient status is $PATIENT_STATUS"
   exit 1
 fi
 
 PATIENT_OUTCOME=$(curl -s "$BASE/Patient/$PATIENT_ID")
 
 CODE=$(echo "$PATIENT_OUTCOME" | jq -r .issue[].code)
 if [ "$CODE" = "deleted" ]; then
-  echo "OK: patient outcome has code deleted"
+  echo "OK 👍: patient outcome has code deleted"
 else
-  echo "Fail: patient outcome has code $CODE"
+  echo "Fail 😞: patient outcome has code $CODE"
   exit 1
 fi

.github/scripts/download-resources-query-sort.sh

@@ -11,26 +11,26 @@ blazectl --no-progress --server "$BASE" download "$TYPE" -q "_sort=$SORT&$QUERY"
 
 SIZE=$(wc -l "$FILE_NAME_PREFIX-get".ndjson | xargs | cut -d ' ' -f1)
 if [ "$EXPECTED_SIZE" = "$SIZE" ]; then
-  echo "Success: download size matches for GET request"
+  echo "OK 👍: download size matches for GET request"
 else
-  echo "Fail: download size was ${SIZE} but should be ${EXPECTED_SIZE} for GET request"
+  echo "Fail 😞: download size was ${SIZE} but should be ${EXPECTED_SIZE} for GET request"
   exit 1
 fi
 
 blazectl --server "$BASE" download "$TYPE" -p -q "_sort=$SORT&$QUERY" -o "$FILE_NAME_PREFIX-post".ndjson
 
 SIZE=$(wc -l "$FILE_NAME_PREFIX-post".ndjson | xargs | cut -d ' ' -f1)
 if [ "$EXPECTED_SIZE" = "$SIZE" ]; then
-  echo "Success: download size matches for POST request"
+  echo "OK 👍: download size matches for POST request"
 else
-  echo "Fail: download size was ${SIZE} but should be ${EXPECTED_SIZE} for POST request"
+  echo "Fail 😞: download size was ${SIZE} but should be ${EXPECTED_SIZE} for POST request"
   exit 1
 fi
 
 if [ "$(diff "$FILE_NAME_PREFIX-get.ndjson" "$FILE_NAME_PREFIX-post.ndjson")" = "" ]; then
-  echo "Success: both downloads are identical"
+  echo "OK 👍: both downloads are identical"
 else
-  echo "Fail: the GET and the POST download differ"
+  echo "Fail 😞: the GET and the POST download differ"
   exit 1
 fi
 
@@ -42,8 +42,8 @@ else
   LAST_UPDATED_SORT=$(echo "$LAST_UPDATED" | sort)
 fi
 if [ "$LAST_UPDATED" = "$LAST_UPDATED_SORT" ]; then
-  echo "Success: resources are sorted"
+  echo "OK 👍: resources are sorted"
 else
-  echo "Fail: resources are not sorted"
+  echo "Fail 😞: resources are not sorted"
   exit 1
 fi

.github/scripts/download-resources-query.sh

@@ -19,25 +19,25 @@ blazectl --no-progress --server "$BASE" download "$TYPE" -q "$QUERY" -o "$FILE_N
 
 SIZE=$(wc -l "$FILE_NAME_PREFIX-get".ndjson | xargs | cut -d ' ' -f1)
 if [ "$EXPECTED_SIZE" = "$SIZE" ]; then
-  echo "Success: download size matches for GET request"
+  echo "OK 👍: download size matches for GET request"
 else
-  echo "Fail: download size was ${SIZE} but should be ${EXPECTED_SIZE} for GET request"
+  echo "Fail 😞: download size was ${SIZE} but should be ${EXPECTED_SIZE} for GET request"
   exit 1
 fi
 
 blazectl --server "$BASE" download "$TYPE" -p -q "$QUERY" -o "$FILE_NAME_PREFIX-post".ndjson
 
 SIZE=$(wc -l "$FILE_NAME_PREFIX-post".ndjson | xargs | cut -d ' ' -f1)
 if [ "$EXPECTED_SIZE" = "$SIZE" ]; then
-  echo "Success: download size matches for POST request"
+  echo "OK 👍: download size matches for POST request"
 else
-  echo "Fail: download size was ${SIZE} but should be ${EXPECTED_SIZE} for POST request"
+  echo "Fail 😞: download size was ${SIZE} but should be ${EXPECTED_SIZE} for POST request"
   exit 1
 fi
 
 if [ "$(diff "$FILE_NAME_PREFIX-get.ndjson" "$FILE_NAME_PREFIX-post.ndjson")" = "" ]; then
-  echo "Success: both downloads are identical"
+  echo "OK 👍: both downloads are identical"
 else
-  echo "Fail: the GET and the POST download differ"
+  echo "Fail 😞: the GET and the POST download differ"
   exit 1
 fi

.github/scripts/evaluate-measure-blazectl-stratifier.sh

@@ -8,19 +8,19 @@ REPORT=$(blazectl --server "$BASE" evaluate-measure ".github/scripts/cql/$NAME.y
 COUNT=$(echo "$REPORT" | jq '.group[0].population[0].count')
 
 if [ "$COUNT" = "$EXPECTED_COUNT" ]; then
-  echo "Success: count ($COUNT) equals the expected count"
+  echo "OK 👍: count ($COUNT) equals the expected count"
 else
-  echo "Fail: count ($COUNT) != $EXPECTED_COUNT"
+  echo "Fail 😞: count ($COUNT) != $EXPECTED_COUNT"
   exit 1
 fi
 
 STRATIFIER_DATA=$(echo "$REPORT" | jq -r '.group[0].stratifier[0].stratum[] | [.value.text, .population[0].count] | @csv')
 EXPECTED_STRATIFIER_DATA=$(cat ".github/scripts/cql/$NAME.csv")
 
 if [ "$STRATIFIER_DATA" = "$EXPECTED_STRATIFIER_DATA" ]; then
-  echo "Success: stratifier data equals the expected stratifier data"
+  echo "OK 👍: stratifier data equals the expected stratifier data"
 else
-  echo "Fail: stratifier data differs"
+  echo "Fail 😞: stratifier data differs"
   echo "$STRATIFIER_DATA"
   exit 1
 fi

.github/scripts/evaluate-measure-blazectl.sh

@@ -7,8 +7,8 @@ EXPECTED_COUNT="$2"
 COUNT=$(blazectl --server "$BASE" evaluate-measure ".github/scripts/cql/$NAME.yml" 2> /dev/null | jq '.group[0].population[0].count')
 
 if [ "$COUNT" = "$EXPECTED_COUNT" ]; then
-  echo "Success: count ($COUNT) equals the expected count"
+  echo "OK 👍: count ($COUNT) equals the expected count"
 else
-  echo "Fail: count ($COUNT) != $EXPECTED_COUNT"
+  echo "Fail 😞: count ($COUNT) != $EXPECTED_COUNT"
   exit 1
 fi

.github/scripts/evaluate-measure-subject-list.sh

@@ -121,9 +121,9 @@ REPORT=$(evaluate-measure "$BASE" "$MEASURE_ID")
 COUNT=$(echo "$REPORT" | jq -r ".group[0].population[0].count")
 
 if [ "$COUNT" = "$EXPECTED_COUNT" ]; then
-  echo "Success: count ($COUNT) equals the expected count"
+  echo "OK 👍: count ($COUNT) equals the expected count"
 else
-  echo "Fail: count ($COUNT) != $EXPECTED_COUNT"
+  echo "Fail 😞: count ($COUNT) != $EXPECTED_COUNT"
   echo "Report:"
   echo "$REPORT" | jq .
   exit 1
@@ -134,9 +134,9 @@ PATIENT_BUNDLE=$(fetch-patients "$BASE" "$LIST_ID")
 ID_COUNT=$(echo "$PATIENT_BUNDLE" | jq -r ".entry[].resource.id" | sort -u | wc -l | xargs)
 
 if [ "$ID_COUNT" = "$EXPECTED_COUNT" ]; then
-  echo "Success: downloaded patient count ($ID_COUNT) equals the expected count"
+  echo "OK 👍: downloaded patient count ($ID_COUNT) equals the expected count"
 else
-  echo "Fail: downloaded patient count ($ID_COUNT) != $EXPECTED_COUNT"
+  echo "Fail 😞: downloaded patient count ($ID_COUNT) != $EXPECTED_COUNT"
   echo "Patient bundle:"
   echo "$PATIENT_BUNDLE" | jq .
   exit 1

.github/scripts/evaluate-measure-timeout.sh

@@ -6,8 +6,8 @@ NAME="$1"
 DIAGNOSTICS=$(blazectl --server "$BASE" evaluate-measure ".github/scripts/cql/$NAME.yml" 2> /dev/null | grep Diagnostics | cut -d: -f2 | xargs)
 
 if [ "$DIAGNOSTICS" = "Timeout of 10 millis eclipsed while evaluating." ]; then
-  echo "Success: timeout happened"
+  echo "OK 👍: timeout happened"
 else
-  echo "Fail: no timeout"
+  echo "Fail 😞: no timeout"
   exit 1
 fi

.github/scripts/evaluate-measure.sh

@@ -95,9 +95,9 @@ REPORT=$(evaluate-measure "$BASE" "$MEASURE_ID")
 COUNT=$(echo "$REPORT" | jq -r ".group[0].population[0].count")
 
 if [ "$COUNT" = "$EXPECTED_COUNT" ]; then
-  echo "Success: count ($COUNT) equals the expected count"
+  echo "OK 👍: count ($COUNT) equals the expected count"
 else
-  echo "Fail: count ($COUNT) != $EXPECTED_COUNT"
+  echo "Fail 😞: count ($COUNT) != $EXPECTED_COUNT"
   echo "Report:"
   echo "$REPORT" | jq .
   exit 1