Merge pull request #36 from scientificcomputing/dokken/update-env

Update environment (and pin dolfinx to subrelease)

.github/workflows/build_docs.yml

@@ -20,11 +20,10 @@ jobs:
     container: ubuntu:22.04
     env:
       PYVISTA_OFF_SCREEN: false
-      PYVISTA_JUPYTER_BACKEND: "panel"
+      PYVISTA_JUPYTER_BACKEND: "html"
 
     steps:
-
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v4
 
       - name: Install common packages
         uses: ./.github/actions/install-dependencies
@@ -36,10 +35,9 @@ jobs:
           key: jupyter-cache-${{ hashFiles('environment.yml') }}
 
       - name: Build the book
-        run:
-          jupyter-book build . -W
+        run: jupyter-book build . -W
 
-      - uses: actions/upload-artifact@v3
+      - uses: actions/upload-artifact@v4
         # always upload artifact, which can include error messages
         if: always()
         with:

docker/Dockerfile

@@ -1,7 +1,7 @@
 FROM condaforge/mambaforge 
 
 ENV DEBIAN_FRONTEND=noninteractive
-ENV PYVISTA_JUPYTER_BACKEND=panel
+ENV PYVISTA_JUPYTER_BACKEND=html
 ENV PYVISTA_OFF_SCREEN=False
 
 # Install ssh (missing dependency to run conda envs)

environment.yml

@@ -6,14 +6,15 @@ dependencies:
   - cycler
   - mpich
   - ipyparallel>=8.6
-  - ipywidgets
   - jupyter-book
   - matplotlib-base
   - mpi4py
   - numpy
   - pandas
-  - pyvista
+  - pyvista>=0.43.*
   - autopep8
-  - fenics-dolfinx
+  - jupyterlab
+  - fenics-dolfinx==0.6.*
   - petsc4py
-  - panel
+  - trame
+  - ipywidgets