feat: Add Cramer-rao uncertainties + covariance using autodiff to non-minuit fits by default #6013
Workflow file for this run
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| name: publish distributions | |
| on: | |
| push: | |
| branches: | |
| - main | |
| tags: | |
| - v* | |
| pull_request: | |
| branches: | |
| - main | |
| - release/v* | |
| release: | |
| types: [published] | |
| # Run weekly at 1:23 UTC | |
| schedule: | |
| - cron: '23 1 * * 0' | |
| workflow_dispatch: | |
| inputs: | |
| publish: | |
| type: boolean | |
| description: 'Publish to TestPyPI' | |
| default: false | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| permissions: | |
| contents: read | |
| jobs: | |
| build: | |
| name: Build Python distribution | |
| runs-on: ubuntu-latest | |
| permissions: | |
| id-token: write | |
| attestations: write | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| - name: Set up Python 3.12 | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - name: Install python-build and twine | |
| run: | | |
| python -m pip install uv | |
| uv pip install --system --upgrade pip | |
| uv pip install --system build twine | |
| python -m pip list | |
| - name: Build a sdist and wheel | |
| if: github.event_name != 'schedule' | |
| run: | | |
| python -m build --installer uv . | |
| - name: Build a sdist and wheel and check for warnings | |
| if: github.event_name == 'schedule' | |
| run: | | |
| PYTHONWARNINGS=error,default::DeprecationWarning python -m build --installer uv . | |
| - name: Verify untagged commits have dev versions | |
| if: "!startsWith(github.ref, 'refs/tags/')" | |
| run: | | |
| latest_tag=$(git describe --tags) | |
| latest_tag_revlist_SHA=$(git rev-list -n 1 ${latest_tag}) | |
| main_SHA="$(git rev-parse --verify origin/main)" | |
| wheel_name=$(find dist/ -iname "*.whl" -printf "%f\n") | |
| if [[ "${latest_tag_revlist_SHA}" != "${main_SHA}" ]]; then # don't check main push events coming from tags | |
| if [[ "${wheel_name}" == *"pyhf-0.1.dev"* || "${wheel_name}" != *"dev"* ]]; then | |
| echo "python-build incorrectly named built distribution: ${wheel_name}" | |
| echo "python-build is lacking the history and tags required to determine version number" | |
| echo "intentionally erroring with 'return 1' now" | |
| return 1 | |
| fi | |
| else | |
| echo "Push event to origin/main was triggered by push of tag ${latest_tag}" | |
| fi | |
| echo "python-build named built distribution: ${wheel_name}" | |
| - name: Verify tagged commits don't have dev versions | |
| if: startsWith(github.ref, 'refs/tags') | |
| run: | | |
| wheel_name=$(find dist/ -iname "*.whl" -printf "%f\n") | |
| if [[ "${wheel_name}" == *"dev"* ]]; then | |
| echo "python-build incorrectly named built distribution: ${wheel_name}" | |
| echo "this is incorrrectly being treated as a dev release" | |
| echo "intentionally erroring with 'return 1' now" | |
| return 1 | |
| fi | |
| echo "python-build named built distribution: ${wheel_name}" | |
| - name: Verify the distribution | |
| run: twine check --strict dist/* | |
| - name: List contents of sdist | |
| run: python -m tarfile --list dist/pyhf-*.tar.gz | |
| - name: List contents of wheel | |
| run: python -m zipfile --list dist/pyhf-*.whl | |
| - name: Generate artifact attestation for sdist and wheel | |
| # If publishing to TestPyPI or PyPI | |
| if: >- | |
| (github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'workflow_dispatch' && github.event.inputs.publish == 'true' && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'release' && github.event.action == 'published' && github.repository == 'scikit-hep/pyhf') | |
| uses: actions/attest-build-provenance@1c608d11d69870c2092266b3f9a6f3abbf17002c # v1.4.3 | |
| with: | |
| subject-path: "dist/pyhf-*" | |
| - name: Upload distribution artifact | |
| uses: actions/upload-artifact@v4.4.0 | |
| with: | |
| name: dist-artifact | |
| path: dist | |
| publish: | |
| name: Publish Python distribution to (Test)PyPI | |
| if: github.event_name != 'pull_request' | |
| needs: build | |
| runs-on: ubuntu-latest | |
| # Mandatory for publishing with a trusted publisher | |
| # c.f. https://docs.pypi.org/trusted-publishers/using-a-publisher/ | |
| permissions: | |
| id-token: write | |
| # Restrict to the environment set for the trusted publisher | |
| environment: | |
| name: publish-package | |
| steps: | |
| - name: Download distribution artifact | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: dist-artifact | |
| path: dist | |
| - name: List all files | |
| run: ls -lh dist | |
| - name: Verify sdist artifact attestation | |
| # If publishing to TestPyPI or PyPI | |
| if: >- | |
| (github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'workflow_dispatch' && github.event.inputs.publish == 'true' && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'release' && github.event.action == 'published' && github.repository == 'scikit-hep/pyhf') | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: gh attestation verify dist/pyhf-*.tar.gz --repo ${{ github.repository }} | |
| - name: Verify wheel artifact attestation | |
| # If publishing to TestPyPI or PyPI | |
| if: >- | |
| (github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'workflow_dispatch' && github.event.inputs.publish == 'true' && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'release' && github.event.action == 'published' && github.repository == 'scikit-hep/pyhf') | |
| env: | |
| GH_TOKEN: ${{ secrets.GITHUB_TOKEN }} | |
| run: gh attestation verify dist/pyhf-*.whl --repo ${{ github.repository }} | |
| - name: Publish distribution 📦 to Test PyPI | |
| # Publish to TestPyPI on tag events of if manually triggered | |
| # Compare to 'true' string as booleans get turned into strings in the console | |
| if: >- | |
| (github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') && github.repository == 'scikit-hep/pyhf') | |
| || (github.event_name == 'workflow_dispatch' && github.event.inputs.publish == 'true' && github.repository == 'scikit-hep/pyhf') | |
| uses: pypa/gh-action-pypi-publish@v1.10.2 | |
| with: | |
| repository-url: https://test.pypi.org/legacy/ | |
| print-hash: true | |
| - name: Publish distribution 📦 to PyPI | |
| if: github.event_name == 'release' && github.event.action == 'published' && github.repository == 'scikit-hep/pyhf' | |
| uses: pypa/gh-action-pypi-publish@v1.10.2 | |
| with: | |
| print-hash: true |