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Sherbrooke Connectivity Imaging Lab

The lab is headed by Professor Maxime Descoteaux, Ph.D and focuses on brain connectivity from state-of-the-art diffusion MRI.

Sherbrooke Connectivity Imaging Laboratory

The lab is headed by Professor Maxime Descoteaux, Ph.D and focuses on brain connectivity from state-of-the-art diffusion MRI acquisition, reconstruction, tractography, processing and visualization. The aim of the SCIL is to better understand structural connectivity, develop novel tractography algorithms, validate them and use them for human brain mapping and connectomics applications.

Useful links:

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  1. scilpy scilpy Public

    The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox

    Python 60 60

  2. tractoflow tractoflow Public

    TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

    Nextflow 52 22

  3. scil-documentation scil-documentation Public

    Documentation for the SCIL

    Python 3 15

Repositories

Showing 10 of 51 repositories
  • nf-neuro Public
    scilus/nf-neuro’s past year of commit activity
    Nextflow 1 GPL-3.0 5 3 4 Updated Sep 29, 2024
  • scil-documentation Public

    Documentation for the SCIL

    scilus/scil-documentation’s past year of commit activity
    Python 3 15 7 2 Updated Sep 26, 2024
  • scilus_website Public

    SCIL website

    scilus/scilus_website’s past year of commit activity
    HTML 0 MIT 6 0 0 Updated Sep 25, 2024
  • tractoflow Public

    TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

    scilus/tractoflow’s past year of commit activity
    Nextflow 52 22 7 0 Updated Sep 23, 2024
  • containers-scilus Public

    Files needed to build a container to run all scilus flows.

    scilus/containers-scilus’s past year of commit activity
    Dockerfile 1 4 0 1 Updated Sep 23, 2024
  • scilpy Public

    The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox

    scilus/scilpy’s past year of commit activity
    Python 60 60 44 17 Updated Sep 20, 2024
  • nf-scil Public

    SCIL Nextflow Toolbox

    scilus/nf-scil’s past year of commit activity
    Nextflow 1 GPL-3.0 16 6 6 Updated Sep 16, 2024
  • scilus/freewater_flow’s past year of commit activity
    Nextflow 5 MIT 4 1 0 Updated Sep 12, 2024
  • scilus/neurogister’s past year of commit activity
    Python 0 1 0 0 Updated Sep 4, 2024
  • scilus/nft-nifti’s past year of commit activity
    Java 0 MIT 3 0 0 Updated Aug 30, 2024

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