Skip to content
Merged
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
23 changes: 12 additions & 11 deletions README.rst
Original file line number Diff line number Diff line change
Expand Up @@ -13,16 +13,17 @@
Scanpy – Single-Cell Analysis in Python
=======================================

.. raw:: html
.. image:: http://falexwolf.de/img/tsne_1.3M.png
:width: 90px
:align: left

<p>
<img src="http://falexwolf.de/img/tsne_1.3M.png" style="width: 90px; margin: 3px 10px 5px 5px" align="left">
Scanpy is a scalable toolkit for analyzing single-cell gene expression
data. It includes preprocessing, visualization, clustering, pseudotime and
trajectory inference and differential expression testing. The Python-based
implementation efficiently deals with datasets of more than one million
cells.
</p>
Scanpy is a scalable toolkit for analyzing single-cell gene expression data.
It includes preprocessing, visualization, clustering, pseudotime and trajectory
inference and differential expression testing. The Python-based implementation
efficiently deals with datasets of more than one million cells.

Read the `documentation <https://scanpy.readthedocs.io>`__.
If Scanpy is useful for your research, consider citing `Genome Biology (2018) <https://doi.org/10.1186/s13059-017-1382-0>`__.
Read the documentation_.
If Scanpy is useful for your research, consider citing `Genome Biology (2018)`_.

.. _documentation: https://scanpy.readthedocs.io
.. _Genome Biology (2018): https://doi.org/10.1186/s13059-017-1382-0