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Merge pull request #75 from seqeralabs/67-update-license-to-apache
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docs: update license to apache 2.0
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ejseqera authored Nov 1, 2023
2 parents 1d284d1 + e96d40f commit b8eb0fc
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573 changes: 201 additions & 372 deletions LICENSE.txt

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14 changes: 14 additions & 0 deletions seqerakit/cli.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

"""
This script is used to build a Seqera Platform instance from a YAML configuration file.
Requires a YAML file that defines the resources to be created in Seqera Platform and
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14 changes: 14 additions & 0 deletions seqerakit/computeenvs.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

"""
Subclass of SeqeraPlatform class for overriding compute environments subcommand methods.
"""
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14 changes: 14 additions & 0 deletions seqerakit/helper.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

"""
This file contains helper functions for the library.
Including handling methods for each block in the YAML file, and parsing
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14 changes: 14 additions & 0 deletions seqerakit/overwrite.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import json
from seqerakit import utils
from seqerakit.seqeraplatform import ResourceExistsError
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14 changes: 14 additions & 0 deletions seqerakit/pipelines.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

"""
Subclass of SeqeraPlatform class for overriding pipelines subcommand methods.
"""
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14 changes: 14 additions & 0 deletions seqerakit/seqeraplatform.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import os
import shlex
import logging
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14 changes: 14 additions & 0 deletions seqerakit/utils.py
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# Copyright 2023, Seqera
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.

import json
import tempfile
import os
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2 changes: 1 addition & 1 deletion setup.py
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author="Esha Joshi, Adam Talbot, Harshil Patel",
author_email="esha.joshi@seqera.io, adam.talbot@seqera.io, harshil.patel@seqera.io",
url="https://github.com/seqeralabs/seqera-kit",
license="MIT",
license="Apache 2.0",
entry_points={"console_scripts": ["seqerakit=seqerakit.cli:main"]},
python_requires=">=3.8, <4", # untested
install_requires=["pyyaml>=6.0.0"],
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