Launch with optimization turned off (#424)

* add missing workflow query attribute to properly retrieve labels

* retrieve optimization status along with workflow labels

* omit optimization data if flag is set

* update tests with optimization data

* test for disabling optimization

* update reflection files

* manually fix missing method in reflection file

* fix: missing query param in test

conf/reflect-config.json

@@ -2825,7 +2825,8 @@
 {
   "name":"io.seqera.tower.model.PipelineOptimizationStatus",
   "allDeclaredFields":true,
-  "queryAllDeclaredMethods":true
+  "queryAllDeclaredMethods":true,
+  "methods":[{"name":"<init>","parameterTypes":["java.lang.String"] }, {"name":"fromValue","parameterTypes":["java.lang.String"] }]
 },
 {
   "name":"io.seqera.tower.model.PipelineSecret",
@@ -2896,13 +2897,14 @@
   "allDeclaredFields":true,
   "allDeclaredMethods":true,
   "allDeclaredConstructors":true,
-  "methods":[{"name":"<init>","parameterTypes":[] }]
+  "methods":[{"name":"<init>","parameterTypes":[] }, {"name":"getLaunch","parameterTypes":[] }]
 },
 {
   "name":"io.seqera.tower.model.SubmitWorkflowLaunchResponse",
   "allDeclaredFields":true,
   "allDeclaredMethods":true,
-  "allDeclaredConstructors":true
+  "allDeclaredConstructors":true,
+  "methods":[{"name":"<init>","parameterTypes":[] }, {"name":"setWorkflowId","parameterTypes":["java.lang.String"] }]
 },
 {
   "name":"io.seqera.tower.model.Task",

src/main/java/io/seqera/tower/cli/commands/LaunchCmd.java

@@ -161,8 +161,8 @@ private WorkflowLaunchRequest updateLaunchRequest(WorkflowLaunchRequest base) th
                 .schemaName(coalesce(adv().schemaName, base.getSchemaName()))
                 .pullLatest(coalesce(adv().pullLatest, base.getPullLatest()))
                 .stubRun(coalesce(adv().stubRun, base.getStubRun()))
-                .optimizationId(base.getOptimizationId())
-                .optimizationTargets(base.getOptimizationTargets())
+                .optimizationId(coalesce(adv().disableOptimization, false) ? null : base.getOptimizationId())
+                .optimizationTargets(coalesce(adv().disableOptimization, false) ? null : base.getOptimizationTargets())
                 .labelIds(base.getLabelIds())
                 .headJobCpus(base.getHeadJobCpus())
                 .headJobMemoryMb(base.getHeadJobMemoryMb());
@@ -373,6 +373,9 @@ public static class AdvancedOptions {
         @Option(names = {"--workspace-secrets"}, split = ",", description = "Pipeline Secrets required by the pipeline execution. Those secrets must be defined in the launching workspace.")
         public List<String> workspaceSecrets;
 
+        @Option(names = {"--disable-optimization"}, description = "Turn off the optimization for the pipeline before launching.")
+        public Boolean disableOptimization;
+
     }
 
 }

src/main/java/io/seqera/tower/cli/commands/runs/DumpCmd.java

@@ -143,7 +143,9 @@ private String collectWorkflowInfo(Long workspaceId) throws IOException, ApiExce
     private String collectWorkflowMetadata(Long workspaceId) throws IOException, ApiException {
         progress.println(ansi("- Workflow metadata"));
 
-        // Workflow metadata aggregates
+        // Workflow metadata aggregates including:
+        // + labels
+        // + optimization status
 
         var workflowDesc = getWorkflowDescription(workspaceId);
         var workflowLaunchDesc = getWorkflowLaunchDescription(workspaceId);
@@ -286,7 +288,7 @@ private void addTaskLog(TarFileHelper.TarFileAppender tar, Long taskId, String l
 
     private DescribeWorkflowResponse getWorkflowDescription(Long workspaceId) throws ApiException {
         if (this.workflowDescription == null) {
-            this.workflowDescription = workflowById(workspaceId, id, List.of(WorkflowQueryAttribute.LABELS));
+            this.workflowDescription = workflowById(workspaceId, id, List.of(WorkflowQueryAttribute.LABELS, WorkflowQueryAttribute.OPTIMIZED));
         }
         return this.workflowDescription;
     }