This is an automatically generated1 list of open source software from the world's 2023 top 50 pharmaceutical companies2 that are present on GitHub. It will be periodically refreshed from these GitHub accounts repositories.
You can also access what they have updated lately and which topics are covered by these software.
Note
stars - number of people who especially appreciated the repository
forks - number of people who have cloned the repository in order to modify it
watchers - number of people who are monitoring changes in the repository
main programming language
license
last update date & time
| Rank | Software |
|---|---|
| 109 | Roche/MAIC R package that facilitates performing matching-adjusted indirect comparison (MAIC) anaylsis for a disconnected treatment network where the endpoint of interest is either time-to-event (e.g. overall survival) or binary (e.g. objective tumor response). evidence-synthesis, health-economic-evaluation, hta, r 2 3 R Apache License 2.0 2023-09-22 13:10:13 |
| 109 | Roche/smart-on-fhir-tutorial Smart on FHIR application for open.epic 2 MIT License 2023-05-31 22:51:51 |
| 109 | Roche/flexsurvPlus R package that facilitates performing survival analysis to support the creation of Excel based economic models by providing helper functions to use alongside the flexsurv package. cost-effectiveness, cost-effectiveness-analysis, health-economic-evaluation, health-economics, hta, r, survival-analysis 2 3 R Apache License 2.0 2023-05-05 08:05:37 |
| 109 | Roche/descem R package that facilitates the use of discrete event simulations without resource constraints for cost-effectiveness analysis. health-economic-evaluation, health-economics, hta, r, survival-analysis 2 1 R Apache License 2.0 2022-07-26 10:20:44 |
| 109 | AstraZeneca/qscheck An R library to perform assertions and decision on input arguments. 2 R Apache License 2.0 2023-10-30 11:26:32 |
| 109 | AstraZeneca/molecular-complexity Python implementation of the molecular complexity metric described by Proudfoot 2017 (http://dx.doi.org/10.1016/j.bmcl.2017.03.008). 2 1 Python Apache License 2.0 2023-10-04 01:46:17 |
| 109 | MolecularAI/transformer_rl Evaluation of Reinforcement Learning in Transformer-based Molecular Design 2 Python Apache License 2.0 2024-03-11 13:24:45 |
| 109 | Sanofi-Public/PMCB-CellBridge PMCB-SCB scRNA-seq pipeline 2 HTML 2024-05-13 15:42:39 |
| 109 | Sanofi-Public/RWD-Proxy-Endpoint-Models 2 Jupyter Notebook Other 2024-04-03 10:22:25 |
| 109 | Sanofi-Public/indication-finding Repository for "Comparing Methods for Identifying Novel Indications of Drugs using Electronic Health Records" publication 2 Python Other 2024-01-26 20:59:59 |
| 109 | Sanofi-Public/DDS-RoFormerMIL 2 1 Python Other 2023-11-13 15:53:20 |
| 109 | Sanofi-Public/IDD-papers-avoiding_failure_modes Repository for the code associated with the paper Avoiding Failure Modes by Maxime Langevin et al. 2 4 Jupyter Notebook Other 2021-11-18 17:28:44 |
| 109 | Sanofi-IADC/jival Validation and health check tool for Jira configurations 2 1 TypeScript 2023-12-15 17:40:02 |
| 109 | biosustain/datacatalog-documentation 2 2024-06-06 12:29:37 |
| 109 | biosustain/dgfreg Regression models of biochemical formation energies 2 Jupyter Notebook MIT License 2024-06-06 11:54:56 |
| 109 | biosustain/incawrapper A python wrapper for Metabolic Flux Analysis (MFA) using INCA with additional functionalities flux, metabolism, modeling 2 Python MIT License 2024-06-03 12:38:19 |
| 109 | biosustain/Growth-coupling-suite A constraint-based metabolic model-based workflow for computing and analyzing microbial strain design which couple a target reaction to growth 2 Python MIT License 2024-05-17 08:43:35 |
| 109 | biosustain/autoprot The autoprot pipeline allows for absolute quantification of proteins from raw mass-spectrometry files in an automated manner. proteomics 2 2 PowerShell GNU General Public License v3.0 2023-07-13 15:01:05 |
| 109 | biosustain/apoptosis Data and code related to the draft paper "Modelling Classical Apoptosis Resistance in CHO cells with CRISPR-Mediated Knock-outs of BAK1, BAX, and BOK Reveals both delayed onset and decreased rates of cell death". 2 Python 2022-02-09 09:21:50 |
| 109 | biosustain/cameo-notebooks Example notebooks for Cameo 2 2 Jupyter Notebook Apache License 2.0 2021-09-08 19:21:06 |
| 109 | biosustain/genomediff-python GenomeDiff (*.gd) file parser for Python breseq, genomediff, genomics, parser 2 5 Python MIT License 2019-10-11 20:51:06 |
| 109 | biosustain/2019-08-26-software-carpentry https://biosustain.github.io/2019-08-26-software-carpentry/ 2 Python Other 2019-08-12 09:37:21 |
| 109 | biosustain/memote-meta-models 2 3 2019-04-11 20:14:12 |
| 109 | biosustain/genomediff-node GenomeDiff (*.gd) file parser for Node.js breseq, genomediff, genomics, parser 2 TypeScript MIT License 2016-02-17 12:19:29 |
| 109 | biosustain/microplate A Node.js package for working with tables and plate layouts loaded from Excel (XLSX). 2 1 JavaScript MIT License 2015-11-13 13:21:06 |
| 109 | NovoNordisk-OpenSource/bifrost-open-telemetry-dotnet-exporter Extension methods for easy instrumentation of Open Telemetry exporters to Bifrost 2 1 C# BSD 3-Clause "New" or "Revised" License 2024-06-04 08:13:35 |
| 109 | bi-compbio/kg_for_ie 2 1 2022-02-23 15:36:04 |
| 109 | Bayer-Group/BIC-AdEProbeat-undefined 2 R GNU General Public License v3.0 2024-04-25 07:31:19 |
| 109 | Bayer-Group/TimberSwift A message forwarding framework for sending logs, analytics, performance, network activity, and other messages to the Parent Application 2 3 Swift Other 2024-02-20 15:56:30 |
| 109 | Bayer-Group/python-concentriq 2 Python Other 2023-05-24 13:37:04 |
| 109 | Bayer-Group/passport-gigya-oauth2 Gigya OAuth 2.0 authentication strategy for Passport. 2 1 JavaScript MIT License 2023-04-19 12:40:54 |
| 109 | Bayer-Group/cdst cdst 2 Jupyter Notebook BSD 3-Clause "New" or "Revised" License 2022-05-08 18:56:22 |
| 109 | Bayer-Group/scenarion A scenario testing package that helps reveal learned relationships between features and the variables they're meant to predict. Use: 1) Build your classification/regression model using SciKit-Learn, keras, or otherwise, 2) pass your model over to Scenarion for scenario testing and visualization of results. 2 1 Jupyter Notebook BSD 3-Clause "New" or "Revised" License 2019-11-01 14:28:49 |
| 109 | Bayer-Group/cf-portal 2 4 JavaScript 2017-11-02 17:00:43 |
| 109 | Bayer-Group/algebraic-datatypes Blog companion code 2 2 Scala Other 2016-01-28 04:46:30 |
| 109 | Bayer-Group/Newick2Network A Python tool to convert Newick trees to Cytoscape compatible networks 2 1 Python Other 2015-11-03 22:04:09 |
| 109 | bayer-science-for-a-better-life/eh-benchmark Boosting GNN performance with lightweight QM features 2 Python MIT License 2021-10-28 12:36:50 |
| 109 | AC-BO-Hackathon/project-zeolite-synthesis-bayesian-optimisation How Bayesian optimization can speed up your zeolite synthesis research 2 Jupyter Notebook MIT License 2024-03-29 03:37:27 |
| 110 | pfizer-opensource/mixed-mode-mpnn MPNNs for Modeling Retention Times from Mixed Mode Chromatography / ESI Negative MS Detection 1 1 Jupyter Notebook Apache License 2.0 2023-03-13 10:35:21 |
| 110 | pfizer-opensource/amplican (forked from: valenlab/amplican) 1 1 R 2021-11-19 09:13:29 |
| 110 | PfizerRD/QCEngine (forked from: MolSSI/QCEngine) Quantum chemistry program executor and IO standardizer (QCSchema). 1 1 2 Python BSD-3-Clause license 2022-05-24 02:47:18 |
| 110 | PfizerRD/QCElemental (forked from: MolSSI/QCElemental) Periodic table, physical constants, and molecule parsing for quantum chemistry. 1 1 2 Python BSD-3-Clause license 2022-03-25 02:45:05 |
| 110 | PfizerRD/cytominer-database (forked from: cytomining/cytominer-database) A package for storing morphological profiling data. 1 1 2 Python specific 2021-06-23 00:48:50 |
| 110 | PfizerRD/Argenomic (forked from: Jonas-Verhellen/Argenomic) Argenomic is an illumination algorithm for optimization of small organic molecules. 1 1 2 Python AGPL-3.0 license 2021-04-22 15:41:48 |
| 110 | PfizerRD/hti-cnn (forked from: ml-jku/hti-cnn) 1 1 4 Python BSD-2-Clause license 2019-05-13 13:52:56 |
| 110 | PfizerRD/protigy (forked from: broadinstitute/protigy) Proteomics Toolset for Integrative Data Analysis 1 1 3 R 2018-11-14 23:07:15 |
| 110 | openPfizer/PfiReConsent Lightweight, in person, eConsent for clinical research box, research, researchkit, swift 1 Swift Apache License 2.0 2018-02-20 14:25:33 |
| 110 | AbbVie-ComputationalGenomics/SCArray Large-scale single-cell RNA-seq data manipulation with GDS files 1 R 2023-03-30 23:33:43 |
| 110 | AbbVie-ComputationalGenomics/benchmark-scrna-normalization 1 R 2022-03-05 22:40:18 |
| 110 | AbbVie-ComputationalGenomics/exactRra 1 R 2021-07-04 17:00:38 |
| 110 | AbbVie-ComputationalGenomics/metaGEO 1 R Apache License 2.0 2017-05-16 16:34:45 |
| 110 | AbbVie-ComputationalGenomics/ADNI_MWG ADNI Methylation Working Group 1 2017-05-01 13:38:09 |
| 110 | abbvie-external/IR-MALDESI-MS Open source CAD models and C# software for making a low-cost IR-MALDESI instrument 1 C# 2023-03-31 14:10:09 |
| 110 | johnsonandjohnson/vxnaid Vxnaid™ is a digital platform that supports correct vaccine administration & efficient vaccination campaigns. 1 1 Kotlin Apache License 2.0 2024-06-06 12:19:14 |
| 110 | johnsonandjohnson/openmrs-module-callflows Module for OpenMRS to allow the integration with the API of IVR providers. Enables sending interactive voice response calls to patients. 1 2 Java Other 2024-05-23 08:58:08 |
| 110 | johnsonandjohnson/openmrs-owa-cfl Module for OpenMRS to allow the CfL User interface Open Web Apps. 1 2 TypeScript Other 2024-05-23 07:29:02 |
| 110 | Novartis/knockoffs-cpt2024paper-simulations An R-repository to run simulation studies as in the paper 'All that glitters is not gold: Type-I error controlled variable selection from clinical trial data' by Zimmermann et al. (2024) 1 R MIT License 2024-03-20 12:01:29 |
| 110 | Novartis/knockofftools An R-package containing a suite of knockoffs functions and methods from existing R-packages and the knockoffs literature. Some of the R functions are novel implementations of recent methods. 1 R MIT License 2024-03-04 13:24:08 |
| 110 | Novartis/dpasurv An R-package for performing dynamic path analysis on survival data with estimation of the corresponding direct, indirect, and total effects. 1 R MIT License 2024-01-18 13:28:52 |
| 110 | Novartis/CELL-REPORTS-D-21-02389R1 Analysis scripts and processed data for CELL-REPORTS-D-21-02389R3 1 R MIT License 2023-02-27 21:40:18 |
| 110 | Novartis/Profile-QSAR Massively multitask stacked model for predicting activity of thousands of biological assays 1 Apache License 2.0 2021-07-16 22:17:51 |
| 110 | Novartis/EQP-QM Unix based RNA-seq quantification module 1 1 Java Apache License 2.0 2020-01-23 08:55:49 |
| 110 | Novartis/mueller_et_al_2018 Processed data relating to Continuous monitoring of patient mobility for 18 months using inertial sensors following traumatic knee injury: a case study Mueller A., Hoefling H., Nuritdinow T., et al. Paper: http://doi.org/10.1159/000490919 Raw data: http://doi.org/10.5281/zenodo.1443190 1 1 Apache License 2.0 2018-10-03 08:22:50 |
| 110 | Novartis/chess-redux 1 JavaScript Apache License 2.0 2017-08-18 15:41:34 |
| 110 | rdkit/rdkit-build-helpers Recipes to build RDKit artifacts (e.g., Java and C# libraries, NuGet packages) and some usage examples 1 3 C# BSD 3-Clause "New" or "Revised" License 2024-02-10 16:43:17 |
| 110 | NovartisFoundation/NF_GitHub 1 1 TypeScript 2022-05-25 08:21:27 |
| 110 | Merck/wpgsd Weighted parametric group sequential design 1 2 R GNU General Public License v3.0 2024-06-06 18:14:32 |
| 110 | Merck/ProbeDesign 1 1 HTML 2024-05-09 13:42:03 |
| 110 | Merck/bayesiansprt The goal of bayesiansprt (under GPL-3 license) is to provide the results for sequential probability ratio test under frequentist and Bayesian setup. 1 1 R GNU General Public License v3.0 2023-05-03 21:26:27 |
| 110 | Merck/3D_Tumor_Lightsheet_Analysis_Pipeline 1 2 Python MIT License 2023-04-06 12:29:03 |
| 110 | Merck/MicroMap_Pipeline 1 1 R Other 2022-08-09 18:53:39 |
| 110 | Merck/mmrm 1 2 R GNU General Public License v3.0 2021-08-18 17:50:15 |
| 110 | Merck/rCPDMS Chemoproteomics Data Analysis 1 1 R GNU General Public License v3.0 2019-07-08 17:30:01 |
| 110 | Merck/BART-QSAR 1 1 R GNU General Public License v3.0 2019-04-13 13:13:16 |
| 110 | insightsengineering/verdepcheck An R package that tests your R package against the min/max versions of specified dependencies check, devtools, r, testing, utils 1 R Other 2024-06-06 09:39:05 |
| 110 | insightsengineering/teal.modules.bsafe Teal modules for bsafe clinical-trials, r 1 R Other 2024-06-05 07:48:32 |
| 110 | insightsengineering/cardx R Package to Supplement ARD Functions Found in {cards} r 1 R Other 2024-06-04 18:09:50 |
| 110 | insightsengineering/r-verdepcheck-action Github Action to check if R package works correctly with minimum version of dependencies installed actions, github-actions, r 1 1 R Apache License 2.0 2024-06-04 14:05:31 |
| 110 | insightsengineering/bsafe TBD clinical-trials, r 1 R Other 2024-05-16 09:45:02 |
| 110 | insightsengineering/pattern-strip Pattern Strip Extension For Quarto r 1 Lua Other 2024-03-15 16:05:19 |
| 110 | insightsengineering/nest-2023-summeR 1 JavaScript Apache License 2.0 2024-03-15 16:00:20 |
| 110 | insightsengineering/r-image-creator Github Action to create R-based Docker images actions, docker, github-actions, r 1 1 Shell Apache License 2.0 2024-03-15 15:54:38 |
| 110 | insightsengineering/codecollaboration 1 2 HTML 2022-05-29 14:11:18 |
| 110 | genentech/spex_frontend 1 2 JavaScript MIT License 2024-05-30 02:01:50 |
| 110 | genentech/spex 1 3 PLpgSQL MIT License 2024-04-18 05:51:52 |
| 110 | genentech/cremp CREMP: Conformer-Rotamer Ensembles of Macrocyclic Peptides for Machine Learning 1 Python MIT License 2024-03-08 20:19:03 |
| 110 | genentech/epiregulon Construct gene regulatory networks and infer transcription factor (TF) activity in single cells by integration of scATAC-seq and scRNA-seq data and incorporation of public bulk TF ChIP-seq data. 1 R Other 2023-11-29 04:14:44 |
| 110 | genentech/cdd_chem 1 1 Python MIT License 2023-05-30 23:06:07 |
| 110 | genentech/t_opt 1 1 Python MIT License 2023-05-30 23:01:53 |
| 110 | genentech/ConMedClassify Process clinical ADaM-format data and classify subjects into profiles based on their concomitant medication usage within a clinical trial. 1 R MIT License 2022-04-14 05:25:15 |
| 110 | genentech/genentech.github.io 1 HTML 2021-02-01 09:21:13 |
| 110 | bedapub/ribiosScripts Rscripts as command-line tools from the corresponding repository on BEDA github. 1 R GNU General Public License v3.0 2024-04-10 09:00:56 |
| 110 | bedapub/ribiosPlot Data transformation and visualization with the ribios suite 1 1 R 2023-09-01 12:36:16 |
| 110 | bedapub/ngs-tools Helper tools written in C, Bash, Python, and R for next-generation sequencing data analysis. 1 C GNU General Public License v3.0 2023-08-14 13:48:30 |
| 110 | bedapub/metadata-registration-api A flask microservice to register and manage metadata via an API. 1 1 Python GNU General Public License v3.0 2023-05-01 23:13:53 |
| 110 | bedapub/ribiosGSEA Functions for gene-set analysis of various kinds supported by ribios 1 2 R 2023-03-29 12:48:31 |
| 110 | bedapub/roger Understand gene expression regulation with ROGER (Roche Omnibus of Gene Expression Regulation) 1 Python GNU General Public License v3.0 2023-01-26 04:31:25 |
| 110 | bioinform/bwa (forked from: walaj/bwa) Burrow-Wheeler Aligner for pairwise alignment between DNA sequences 1 1 C Apache-2.0 license 2022-01-16 21:35:23 |
| 110 | bioinform/Daedalus 1 C++ Other 2022-01-06 22:10:46 |
| 110 | bioinform/QBC_Single_Cell_Analysis_NGS 1 C++ GNU General Public License v3.0 2020-02-03 21:48:39 |
| 110 | bioinform/huref-gs 1 2017-02-02 19:08:10 |
| 110 | bioinform/pindel (forked from: genome/pindel) Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads. 1 53 C++ GPL-3.0 license 2014-06-20 01:28:02 |
| 110 | AstraZeneca/dpp_imp Improved clinical data imputation via classical and quantum determinantal point processes 1 Python 2024-04-03 21:20:50 |
| 110 | AstraZeneca/adhce 1 R Apache License 2.0 2024-01-19 13:34:51 |
| 110 | AstraZeneca/trim21-bioprotac Bioinformatics data analyses - Fletcher A. et al., Nature Communications 2023, doi: 10.1038/s41467-023-42546-2 1 Apache License 2.0 2023-11-12 19:59:16 |
| 110 | AstraZeneca/survextrap-excesshazards Demonstration of excess hazard and excess hazard cure models for survival extrapolation 1 R Apache License 2.0 2023-02-23 10:52:46 |
| 110 | AstraZeneca/multitask_impute Supplementary code for 'Deep Learning Imputation for Multi Task Learning' 1 Python Apache License 2.0 2022-07-15 16:35:03 |
| 110 | AstraZeneca/OCT_publication This repository contains the source code for the image analysis of optical coherence tomography images, as stated in the publication of Volumetric wound healing by machine learning and optical coherence tomography in type 2 diabetes. 1 MATLAB Apache License 2.0 2022-06-29 13:30:26 |
| 110 | MolecularAI/reinvent-scoring-gpflow Code for paper "Human-in-the-Loop Assisted de Novo Molecular Design". 1 Python Apache License 2.0 2023-03-17 15:17:26 |
| 110 | MolecularAI/IcolosData Contains the data required for the example workflows and jupyter notebooks utilizing the Icolos workflow manager 1 3 Rich Text Format Apache License 2.0 2023-03-16 16:15:53 |
| 110 | AstraZeneca-NGS/cbioportal (forked from: cBioPortal/cbioportal) 1 6 JavaScript AGPL-3.0 license 2016-02-10 19:05:53 |
| 110 | astrazeneca-cgr-publications/OncMTR OncMTR: Oncology-specific MTR score 1 Jupyter Notebook Mozilla Public License 2.0 2024-06-03 18:25:23 |
| 110 | Sanofi-Public/crai 1 Python 2024-05-31 17:21:37 |
| 110 | Sanofi-Public/IDD-Collective-Intelligence 1 Jupyter Notebook Other 2024-05-03 20:02:43 |
| 110 | Sanofi-Public/PMCB-Genix Gene Expression Network Importance eXamination 1 1 R 2023-12-24 21:44:27 |
| 110 | GSK-Biostatistics/beastt 1 R Apache License 2.0 2024-06-07 08:36:40 |
| 110 | Gilead-BioStats/gsmApp 1 1 HTML Apache License 2.0 2024-06-07 20:42:26 |
| 110 | EliLillyCo/NLTiterEstimator 1 MIT License 2023-10-03 15:06:20 |
| 110 | EliLillyCo/surfaltr 1 R Other 2022-05-02 23:11:20 |
| 110 | EliLillyCo/extrapolation_app This is the extrapolation simulation app for the FDA – PhRMA Continuous Engagement Complex Innovative Clinical Trial Designs. 1 1 R MIT License 2019-02-12 21:31:47 |
| 110 | biosustain/dsp_nf-metagenomics Shotgun metagenomics pipeline to process microbiome samples metagenomics, nextflow-pipeline 1 Shell GNU General Public License v3.0 2024-06-06 11:48:39 |
| 110 | biosustain/lifelike Turning big data into contextualized knowledge. Lifelike is a modern application platform for data extraction, analysis and visualization. angular, big-data, bioinformatics, docker, helm, knowledge-graph, python, scientific-computing 1 1 Python 2024-04-17 12:42:25 |
| 110 | biosustain/co Make mutated copies of DNA components in BioPython biopython, genomics, microbial-genomics, python 1 2 Python Other 2022-08-25 14:34:55 |
| 110 | biosustain/AutoFlow-HTC AutoFlow High Throughput Cultivation 1 1 Python MIT License 2021-07-08 12:48:12 |
| 110 | biosustain/OpentronsCovid19 1 Python 2020-06-04 08:08:58 |
| 110 | biosustain/chemical-tolerance-supplementary 1 Jupyter Notebook 2019-09-20 20:30:45 |
| 110 | biosustain/ec_iYO844 Enzyme constrained B. subtilis model (based on iYO844) 1 2 MATLAB 2018-12-15 11:13:47 |
| 110 | biosustain/obo 1 1 Python MIT License 2017-03-28 07:31:10 |
| 110 | biosustain/polyplot A wrapper for our favorite python plotting libraries that makes high-quality plots of common data. 1 Python Apache License 2.0 2016-04-29 08:31:37 |
| 110 | biosustain/MuSIC-PDO-3HP Supplementary materials for "Multiscale Analysis of the Sustainable Production of 1,3-PDO and 3HP" 1 Python 2015-06-17 13:21:53 |
| 110 | NovoNordisk-OpenSource/heimdall-midgard-valkyrie 1 C# GNU General Public License v3.0 2024-04-24 08:50:30 |
| 110 | NovoNordisk-OpenSource/heimdall-templates-dotnet-microservice Generic .NET Microservice template for Heimdall capabilities and other container based workloads 1 C# GNU General Public License v3.0 2024-04-24 08:47:33 |
| 110 | NovoNordisk-OpenSource/backstage (forked from: backstage/backstage) Backstage is an open platform for building developer portals 1 TypeScript Apache-2.0 license 2024-04-18 13:22:13 |
| 110 | NovoNordisk-OpenSource/heimdall-dotnet-aspire-poc 1 C# GNU General Public License v3.0 2024-02-27 15:10:13 |
| 110 | nn-dma/generate-verification-report Takes metadata and test results as input and generates a verification report as output. 1 Go 2024-06-06 06:29:54 |
| 110 | uwece-engine-novo-aed/Cognix-PR-CardinalKitTemplateApplication (forked from: StanfordSpezi/SpeziTemplateApplication) For use to PR/contribute into the CardinalKitTemplateApplication repository from StanfordBDHG 1 2 Swift MIT license 2023-03-12 20:32:40 |
| 110 | Boehringer-Ingelheim/dv.manager 1 1 R Other 2024-06-07 09:49:40 |
| 110 | Boehringer-Ingelheim/Personalis-io Read Personalis datasets into MultiAssayExperiment objects bioconductor, multiassayexperiment, personalis, real-world-evidence 1 R GNU General Public License v3.0 2024-05-13 14:45:48 |
| 110 | Boehringer-Ingelheim/tipmap Tipping Point Analysis for Bayesian Dynamic Borrowing bayesian-borrowing, bayesian-methods, clinical-trial, cran, evidence-synthesis, extrapolation, pediatrics, pharmaceutical-development, prior-elicitation, r, r-package, tipping-point, weighting 1 R 2024-04-04 19:16:58 |
| 110 | bi-compbio/scrnax A snakemake pipeline improves the gene annotation for cross species analysis of single cell RNA-Seq 1 Python MIT License 2021-10-25 04:24:17 |
| 110 | Bayer-Group/MOCCAbeat-undefined 1 1 Python MIT License 2024-06-05 15:46:04 |
| 110 | Bayer-Group/xtbfbeat-undefined 1 1 Python BSD 3-Clause "New" or "Revised" License 2024-05-31 07:34:06 |
| 110 | Bayer-Group/pybalancebeat-undefined 1 Jupyter Notebook BSD 3-Clause "New" or "Revised" License 2024-05-30 09:51:48 |
| 110 | Bayer-Group/terraform-aws-autoken 🔒 GitHub Action for short lived credentials to access resources in CI/CD artifactory, credentials, github-actions, oidc, sonarqube 1 TypeScript BSD 3-Clause "New" or "Revised" License 2024-05-07 01:23:15 |
| 110 | Bayer-Group/VCG-resampling preparation for moving open source submission https://github.com/bayer-int/bayer-open-source-submissions/issues/31 beat-undefined 1 BSD 3-Clause "New" or "Revised" License 2024-03-07 09:33:06 |
| 110 | Bayer-Group/KGE-Frontend 1 1 TypeScript BSD 3-Clause "New" or "Revised" License 2023-07-08 19:11:57 |
| 110 | Bayer-Group/torch_cddd 1 Python MIT License 2023-02-06 23:02:24 |
| 110 | Bayer-Group/WaterBase 1 R GNU General Public License v3.0 2023-01-09 14:30:07 |
| 110 | Bayer-Group/httpbin A simple docker container running httpbin 1 2 BSD 3-Clause "New" or "Revised" License 2017-10-26 13:35:45 |
| 110 | Bayer-Group/BadranEtAl2015 Analysis scripts for Badran et al 2015 1 R Other 2016-04-27 18:34:07 |
| 110 | Bayer-Group/standards Standards for contributing to MonsantoCo open source projects 1 1 2015-11-24 15:07:18 |
| 110 | Bayer-Group/fleet-client A Scala client for the fleet API 1 2 Scala BSD 3-Clause "New" or "Revised" License 2015-07-11 16:34:42 |
| 110 | bayer-science-for-a-better-life/XAI4Embeddings 1 Python 2021-10-05 09:19:31 |
| 110 | bayer-science-for-a-better-life/beehive Side project for helping beekeepers. Segment and classify honeycomb pictures to find out how many larvae, eggs, nectar, etc are in the brood. 1 1 Python 2021-04-09 17:59:16 |
| 110 | bayer-science-for-a-better-life/pytorch-lightning (forked from: Lightning-AI/pytorch-lightning) The lightweight PyTorch wrapper for ML researchers. Scale your models. Write less boilerplate 1 1 Python Apache-2.0 license 2020-05-26 15:00:23 |
| 110 | bayer-science-for-a-better-life/openslide-python-feedstock A conda-smithy repository for openslide-python. 1 1 Shell BSD 3-Clause "New" or "Revised" License 2020-01-30 17:29:27 |
| 110 | modernatx/ionizable_amino_lipids_distribution 1 Jupyter Notebook Other 2023-05-15 19:16:17 |
| 110 | AC-BO-Hackathon/project-noisy-nerds project-project-noisy-nerds created by GitHub Classroom 1 Jupyter Notebook 2024-04-12 20:58:17 |
| 110 | AC-BO-Hackathon/BOPE-GPT Project 16 on BOPE-GPT 1 3 Jupyter Notebook GNU General Public License v3.0 2024-04-03 14:09:14 |
| 110 | AC-BO-Hackathon/project-simplegpt-bo project-simplegpt-bo created by GitHub Classroom 1 Python MIT License 2024-04-03 01:11:07 |
| 110 | AC-BO-Hackathon/Chihuahuas The Impact of Dataset Size on Bayesian Optimization, Insights from the QM9 Dataset 1 2 Jupyter Notebook 2024-04-02 19:44:41 |
| 110 | AC-BO-Hackathon/project-AiChemMcGill intro-to-github-classroom-ngastellu created by GitHub Classroom 1 Jupyter Notebook 2024-03-29 06:09:26 |
| 110 | AC-BO-Hackathon/project-optimystics project-project-20-optimystics created by GitHub Classroom 1 Python 2024-03-29 03:37:27 |
| 110 | Biogen-Inc/EditExpress 1 1 Python 2018-06-28 20:16:07 |
| 110 | servierhub/top-life-sciences Top Life Sciences open-source software ai, awesome, awesome-list, awesome-lists, bioinformatics, biology, biology-ai, computational-biology, computational-chemistry, ebiology, life-sciences, lifescience, lifesciences, pharma, pharmaceuticals, servier 1 2024-06-06 07:56:59 |
| 110 | servierhub/top-pharma50 Top open source software from the top 50 pharmaceutical companies ai, awesome, awesome-list, awesome-lists, bioinformatics, biology-ai, computational-biology, computational-chemistry, ebiology, life-sciences, lifescience, lifesciences, pharma, pharmaceuticals, servier 1 2024-06-01 15:52:09 |
| 110 | servierhub/top-pharma-fr Top open source software from French pharmaceutical companies ai, awesome, awesome-list, awesome-lists, bioinformatics, biology-ai, computational-biology, computational-chemistry, ebiology, france, french, life-sciences, lifescience, lifesciences, pharma, pharmaceuticals, servier 1 2024-06-01 15:09:59 |
| 110 | servierhub/top-prisme PRISME Forum members on GitHub awesome, awesome-list, awesome-lists, biotechnology, pharma, pharmaceuticals, servier 1 2024-06-01 14:54:07 |
| 110 | servierhub/prose Bring the power of gen-ai to the CI/CD assistant-cli, cicd, documentation, gen-ai, servier, test-automation 1 Python GNU General Public License v3.0 2024-03-14 01:39:11 |
| 111 | pfizer-opensource/carver Clinical Analysis Reporting and Visualization Ensemble (in R) R Apache License 2.0 2024-05-22 11:34:39 |
| 111 | pfizer-opensource/pharma-hands-on-exercises Rmd training files for getting started with R. Introduces R concepts for data manipulation, visualization and other topics using PhUSE synthetic data. R Creative Commons Attribution Share Alike 4.0 International 2024-05-14 19:27:09 |
| 111 | pfizer-opensource/shiny-framework Shiny Framework for reproducible content - Create table in Shiny, then run a production step (on HPC GRID) and compare table objects for 100% match R Apache License 2.0 2024-05-09 20:59:46 |
| 111 | pfizer-opensource/LISTT Lyme In Silico Typing Tool for Borrelia burgdorferi s.l. Python Apache License 2.0 2024-02-26 18:21:57 |
| 111 | pfizer-opensource/remaster-the-tidyverse-pfizer Apache License 2.0 2024-02-21 21:47:01 |
| 111 | pfizer-opensource/DeepMLAST Deep learning project for automated semantic segmentation of spontaneous lung tumors in murine microCT MATLAB Apache License 2.0 2023-11-03 20:34:58 |
| 111 | pfizer-opensource/Peripheral-blood-cellular-dynamics-of-Rheumatoid-arthritis R Apache License 2.0 2023-05-26 14:01:34 |
| 111 | PfizerRD/descriptastorus (forked from: bp-kelley/descriptastorus) Descriptor computation(chemistry) and (optional) storage for machine learning 2 Python specific 2021-09-18 04:17:42 |
| 111 | PfizerRD/CbAS (forked from: dhbrookes/CbAS) Code for the ICML 2019 paper 'Conditioning by adaptive sampling for robust design' 2 Jupyter Notebook 2019-05-10 19:10:55 |
| 111 | PfizerRD/bamtools (forked from: pezmaster31/bamtools) C++ API & command-line toolkit for working with BAM data 2 C++ MIT license 2017-12-23 18:12:12 |
| 111 | PfizerRD/snow-labs (forked from: HPCNow/hpcnow-labs) sNow! training material and hands-on session 3 C GPL-3.0 license 2017-08-20 00:06:23 |
| 111 | ResAppHealth/gmp-ios-builder (forked from: NeoTeo/gmp-ios-builder) A bash 4 script to build the Gnu Multi Precision library as a framework for iOS devices (and Simulators). 1 Shell 2023-03-16 05:08:34 |
| 111 | ResAppHealth/toolchain-wrapper (forked from: zw3rk/toolchain-wrapper) Scripts for building GHC and Haskell programs for Android and iOS 1 Shell 2021-01-11 03:21:07 |
| 111 | ResAppHealth/PhoneNumberKit (forked from: marmelroy/PhoneNumberKit) A Swift framework for parsing, formatting and validating international phone numbers. Inspired by Google's libphonenumber. 1 Swift MIT license 2020-08-21 01:28:11 |
| 111 | ResAppHealth/path (forked from: commercialhaskell/path) Typed filepath 1 Haskell specific 2020-03-02 23:54:55 |
| 111 | ResAppHealth/foldl-statistics (forked from: nkpart/foldl-statistics) An reimplementation of the Statistics.Sample Haskell module using the foldl package 1 Haskell specific 2019-12-20 00:01:06 |
| 111 | ResAppHealth/HSvm (forked from: paulrzcz/HSvm) Haskell bindings of libsvm library 1 6 C++ BSD-2-Clause license 2019-11-19 03:39:14 |
| 111 | ResAppHealth/peertalk (forked from: sketch-hq/peertalk) iOS and Mac Cocoa library for communicating over USB 7 Objective-C MIT license 2019-10-23 07:51:56 |
| 111 | ResAppHealth/ghcid (forked from: ndmitchell/ghcid) Very low feature GHCi based IDE 2 Haskell BSD-3-Clause license 2019-09-05 00:53:13 |
| 111 | ResAppHealth/intel-ipp (forked from: timsears/intel-ipp) A nix package for Intel IPP 6 Nix 2019-04-23 03:54:05 |
| 111 | ResAppHealth/xlsx (forked from: qrilka/xlsx) Simple and incomplete Excel file parser/writer 5 Haskell MIT license 2018-09-17 22:21:08 |
| 111 | ResAppHealth/rncryptor-hs (forked from: nkpart/rncryptor-hs) Haskell implementation of the RNCryptor encrypted file format by Rob Napier 5 Haskell MIT license 2018-01-04 03:43:04 |
| 111 | ResAppHealth/URL2PDF (forked from: scottgarner/URL2PDF) Commandline utility to download URLs as PDFs and a wrapper action for Apple's Automator. 5 Objective-C BSD-3-Clause license 2015-12-10 19:11:02 |
| 111 | openPfizer/vpop-demo MATLAB Apache License 2.0 2021-03-01 18:32:36 |
| 111 | openPfizer/ACoP11 Files and presentations from ACoP11 (2020) Apache License 2.0 2020-10-09 14:32:34 |
| 111 | openPfizer/ACoP10 Disclosed posters and presentations from ACoP10 2019 in Orlando, FL Apache License 2.0 2019-10-15 22:49:59 |
| 111 | pfizer-operations-and-insights/terraform-provider-solidserver (forked from: EfficientIP-Labs/terraform-provider-solidserver) A simple Terraform provider to interact with EfficientIP's SOLIDServer Go BSD-2-Clause license 2024-04-19 12:36:27 |
| 111 | AbbVie-ComputationalGenomics/COVID19_coloc_shiny R shiny app to interact with COVID-19 GWAS QTL colocalization results 1 R Apache License 2.0 2024-04-26 04:06:42 |
| 111 | abbvie-external/oracle-helpers A collection of helpers for alleviating boilerplate in node with OracleDB nodejs, oracledb, sql TypeScript MIT License 2024-04-01 23:41:21 |
| 111 | abbvie-external/OmicNavigatorMultimodelExample HTML MIT License 2023-08-25 16:08:45 |
| 111 | abbvie-external/OmicNavigatorExample Example code to create an OmicNavigator study 3 R MIT License 2023-08-21 22:05:20 |