New version 1.3.3

What's Changed

• bugfixes by @beardymcjohnface in #109
• Dev by @beardymcjohnface in #119

Full Changelog: v1.3.2...v1.3.3

v1.3.2

What's Changed

• Dev by @beardymcjohnface in #105

Full Changelog: v1.3.1...v1.3.2

v1.3.1

What's Changed

• Dev by @beardymcjohnface in #103

Full Changelog: v1.3.0...v1.3.1

v1.3.0

What's Changed

• Dev by @beardymcjohnface in #92
• Update dev by @beardymcjohnface in #93
• Dev by @beardymcjohnface in #94
• unit test updates by @beardymcjohnface in #102

Full Changelog: v1.2.0...v1.3.0

V1.2.0

Many bugfixes and new features. Misc refactoring etc to hopefully improve performance with schedulers. The config file has changed quite a bit but it should be more readable and streamlined. There is now a new co-assembly method --assembly co or the original and default cross-assembly method --assembly cross. --preprocess is now --library.

What's Changed

• Dev by @beardymcjohnface in #89

Full Changelog: v1.1.0...v1.2.0

v1.1.0

Big update with lots of bugfixes, pipeline improvements, CLI changes etc.

v1.0.1

New release. This update includes a ton of bugfixes as well as new features including new and updated preprocessing modules for single-end seq, longread seq, and round AB random RNA amplification library preps.

v1.0.0.beta.5

Bugfixes for Hecatomb

v1.0.0.beta.4

Bugfixes and updates:

• normCounts is now CPM (counts per million) rather than normalised to the median sample size. allows for easily combining different hecatomb runs
• summary counts are optional (controlled via --report) - preprocessing should be easier on HDD space now too
• config file is dumped to working directory

v1.0.0.beta.3

Updates:

• bugfixes
• updated assembly approach
• documentation for readthedocs