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Fix: Remove deprecated imports
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Modify: test_bids::test_invalid_datatype, loop should iterate over folders only
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sinhaharsh committed Jan 31, 2024
1 parent 638d54e commit 78252da
Showing 1 changed file with 4 additions and 6 deletions.
10 changes: 4 additions & 6 deletions MRdataset/tests/test_bids.py
Original file line number Diff line number Diff line change
@@ -1,17 +1,14 @@
import glob
import shutil
import tempfile
from collections import defaultdict
from pathlib import Path

import hypothesis.strategies as st
import pytest
from bids import BIDSLayout
from hypothesis import given, settings, HealthCheck

from MRdataset import import_dataset
from MRdataset.bids import BidsDataset
from MRdataset.tests.simulate import make_compliant_test_dataset, \
make_multi_echo_dataset, copyeverything, make_compliant_bids_dataset
from MRdataset.tests.simulate import make_compliant_bids_dataset

THIS_DIR = Path(__file__).parent.resolve()

Expand Down Expand Up @@ -71,7 +68,8 @@ def test_invalid_datatype():

def rename_folders(directory):
# rename all folders to "mnat"
for folder in directory.iterdir():
for folder in glob.glob(str(directory) + '/*/'):
folder = Path(folder)
if ('sub' not in folder.name) and ('ses' not in folder.name):
folder.rename(folder.parent / 'mnat')
rename_folders(folder.parent / 'mnat')
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