RManualGeneration #132
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| # This workflow will autogenerate a manual for usage of Rsirius | |
| # For more information see: https://cran.r-project.org/web/packages/roxygen2/vignettes/roxygen2.html | |
| name: RManualGeneration | |
| on: [workflow_dispatch] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 30 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| r-version: ["4.4.0"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up R ${{ matrix.r-version }} | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.r-version }} | |
| - name: Install libcurl4 | |
| run: | | |
| sudo apt-get update -y | |
| sudo apt-get install -y libcurl4-openssl-dev | |
| - name: Install curl | |
| run: install.packages("curl") | |
| shell: Rscript {0} | |
| - name: Install httr2 | |
| run: install.packages("httr2") | |
| shell: Rscript {0} | |
| - name: Install jsonlite | |
| run: install.packages("jsonlite") | |
| shell: Rscript {0} | |
| - name: Install base64enc | |
| run: install.packages("base64enc") | |
| shell: Rscript {0} | |
| - name: Install remotes | |
| run: install.packages("remotes") | |
| shell: Rscript {0} | |
| - name: Extract RoxygenNote version | |
| id: roxygen_version | |
| run: | | |
| version=$(grep "^RoxygenNote: " client-api_r/generated/DESCRIPTION | awk '{print $2}') | |
| echo "roxygen_note=$version" >> $GITHUB_OUTPUT | |
| - name: Install roxygen2 | |
| run: remotes::install_version("roxygen2", version = "${{ steps.roxygen_version.outputs.roxygen_note }}") | |
| shell: Rscript {0} | |
| - name: Generate Rsirius Manual | |
| run: roxygen2::roxygenize("client-api_r/generated", roclets = NULL, load_code = NULL, clean = TRUE) | |
| shell: Rscript {0} | |
| - name: update files and push to remote | |
| uses: stefanzweifel/git-auto-commit-action@v4.15.2 | |
| with: | |
| commit_message: Auto-Generated RSirius Manual |