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  • mrftoptools Public

    Optimization of various MRF sequence protocol parameters.

    Python Other Updated Jan 18, 2025
  • woodnet Public

    Data processing and classification pipeline for volume computed tomography scans of wood samples.

    Python MIT License Updated Dec 28, 2024
  • npy2nrrd Public

    Thin wrapper and CLI tooling to convert between numpy array files and NRRD data.

    Python MIT License Updated Nov 13, 2024
  • quantools Public

    Lightweight toolkit to evaluate and visualize segmentation volume metrics.

    Python MIT License Updated Nov 3, 2024
  • Additional companion tooling for demonstration purposes, visualization and data loading for the woodnet pipeline and paper project.

    Python MIT License Updated Oct 22, 2024
  • Supplementary showcase elements of the woodnet pipeline and package project-

    Jupyter Notebook MIT License Updated Oct 10, 2024
  • Project repository for personal web page.

    TeX MIT License Updated Sep 16, 2024
  • Customized Hugo blox for personal website purposes.

    HTML MIT License Updated Sep 10, 2024
  • Small julia-lang-based experiment scripts to explore the solution of the diffusion partial differential equation with the numerical finite difference method.

    Julia 1 MIT License Updated Jul 23, 2024
  • webcoch Public

    This project encompasses a small web application to perform visually guided polls about (a) hearing thresholds and (b) the preference of segmentations in CT data.

    Python Updated Jun 11, 2024
  • Educational material for the machine learning and deep learning tutorial course

    MIT License Updated Feb 28, 2024
  • phantom Public

    Python Updated Feb 18, 2024
  • mrtwin-docs Public

    HTML Updated Jan 16, 2024
  • gpmerger Public

    Small CLI utility to merge GoPro chaptered video files while preserving the gyroscopic movement data.

    Python MIT License Updated Dec 7, 2023
  • Visualization and presentation of results concerning the automated inner ear project.

    Jupyter Notebook Updated Aug 30, 2023
  • Compatibility layer to transduce the Cochlea dataset by Wimmer et al. to internally usable formats

    Python Updated Aug 6, 2023
  • foldmake Public

    Primitev tool for the auto-generation of cross-validation folds based on files discovered in a provided filesystem directory.

    Python Updated May 16, 2023
  • Supporting code for spectral analysis with deep learning

    Python Updated Sep 3, 2022
  • hausdorff Public

    Conveniently compute the Hausdorff distance to evaluate set or segmentations metrics.

    Python 1 Apache License 2.0 Updated Aug 30, 2022
  • mrbreader Public

    Small tool to unpack and prepare MRB (medical reality bundle) files from the 3D Slicer as a supervised deep learning data source.

    Python 3 1 Updated May 31, 2022
  • hd-cuda Public

    Attempt to implement the calculation of the Hausdorff distance as a brute force CUDA program :)

    Cuda 1 Updated Oct 16, 2021
  • logpull Public

    Python Updated Aug 11, 2021
  • viztools Public

    Python Updated Aug 4, 2021
  • Differentiable computations of the signature and logsignature transforms, on both CPU and GPU.

    C++ Apache License 2.0 Updated May 11, 2020