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mrftoptools Public
Optimization of various MRF sequence protocol parameters.
Python Other UpdatedJan 18, 2025 -
woodnet Public
Data processing and classification pipeline for volume computed tomography scans of wood samples.
Python MIT License UpdatedDec 28, 2024 -
npy2nrrd Public
Thin wrapper and CLI tooling to convert between numpy array files and NRRD data.
Python MIT License UpdatedNov 13, 2024 -
quantools Public
Lightweight toolkit to evaluate and visualize segmentation volume metrics.
Python MIT License UpdatedNov 3, 2024 -
wn-companiontools Public
Additional companion tooling for demonstration purposes, visualization and data loading for the woodnet pipeline and paper project.
Python MIT License UpdatedOct 22, 2024 -
woodnet-showcase Public
Supplementary showcase elements of the woodnet pipeline and package project-
Jupyter Notebook MIT License UpdatedOct 10, 2024 -
stebix.github.io Public
Project repository for personal web page.
TeX MIT License UpdatedSep 16, 2024 -
stebix-hugo-blox Public
Customized Hugo blox for personal website purposes.
HTML MIT License UpdatedSep 10, 2024 -
diffusion-fdm Public
Small julia-lang-based experiment scripts to explore the solution of the diffusion partial differential equation with the numerical finite difference method.
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webcoch Public
This project encompasses a small web application to perform visually guided polls about (a) hearing thresholds and (b) the preference of segmentations in CT data.
Python UpdatedJun 11, 2024 -
mdl-tutorial Public
Educational material for the machine learning and deep learning tutorial course
MIT License UpdatedFeb 28, 2024 -
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gpmerger Public
Small CLI utility to merge GoPro chaptered video files while preserving the gyroscopic movement data.
Python MIT License UpdatedDec 7, 2023 -
Visualization and presentation of results concerning the automated inner ear project.
Jupyter Notebook UpdatedAug 30, 2023 -
wim-transduce Public
Compatibility layer to transduce the Cochlea dataset by Wimmer et al. to internally usable formats
Python UpdatedAug 6, 2023 -
foldmake Public
Primitev tool for the auto-generation of cross-validation folds based on files discovered in a provided filesystem directory.
Python UpdatedMay 16, 2023 -
pfey-rewrite Public
Supporting code for spectral analysis with deep learning
Python UpdatedSep 3, 2022 -
hausdorff Public
Conveniently compute the Hausdorff distance to evaluate set or segmentations metrics.
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mrbreader Public
Small tool to unpack and prepare MRB (medical reality bundle) files from the 3D Slicer as a supervised deep learning data source.
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hd-cuda Public
Attempt to implement the calculation of the Hausdorff distance as a brute force CUDA program :)
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signatory Public
Forked from patrick-kidger/signatoryDifferentiable computations of the signature and logsignature transforms, on both CPU and GPU.
C++ Apache License 2.0 UpdatedMay 11, 2020