- 👋 Hi everyone, I’m Jan Rogel (@sunPi).
- 👀 I’m interested in Bioinformatics and anything related (Molecular Biology, Biotechnology, etc.)
- 🌱 I’m currently specializing in cancer sciences (genomic) analyses with an emphasis on mesothelial cancer
- 💞️ I’m looking to collaborate on R/Python/BASH projects involving machine learning (deep learning), protein modelling or gene expression prediction.
- 📫 You can reach me on my email: jan.rogel@gmail.com
sunPi
Logical | Creative | Complex
University of Leicester: MSc Bioinformatics
PhD Cancer Studies
Interests: Machine Learning, Pipeline development
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Leicester Cancer Research Center
- Leicester, UK
- http://www.mesothelioma-research-leicester.com/
- https://orcid.org/0000-0002-4902-8325
- in/jan-rogel-39210964
Pinned Loading
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dqGSEA
dqGSEA PublicRuns Gene Set Enrichment Analysis with a ranked gene list, that is generated based on the options selected. Curerntly only DESeq2 is supported.
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ssGSVA
ssGSVA PublicThis is just a simple wrapper for the single sample method of the GSVA package. It offers a docopt header, so it can be run via the console. The packages should be automatically installed, if neces…
R
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