Caculate the genetic distance of Dxy(like Fst) between the two populations form the vcf file(.gz foramt) .
usage: win_Dxy.py [-h] -v vcf -p poplist [-w window [default:100000]] [-s step [default:50000]] [-o output [default:Dxy.txt]]
optional arguments: -h, --help show this help message and exit
-v vcf vcf file with gz format
-p poplist input the two populations file,each row represent one pop
Example:
pop1:Sampl1 sample2
pop2:Sample3 Sample4
-w window [default:100000]
window size
-s step [default:50000]
step size
-o output [default:Dxy.txt]
output file