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Merge pull request #4 from swag-kaust/beta
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cleaned up (hh_elastic + unused variables)
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@vkazei
vkazei authored Sep 18, 2016
2 parents f427def + 115bd1b commit 898ee05
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Showing 11 changed files with 1,557 additions and 127 deletions.
Binary file modified SOFI3D_org/bin/partmodel
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Binary file modified SOFI3D_org/bin/seismerge
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Binary file modified SOFI3D_org/bin/snapmerge
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Binary file modified SOFI3D_org/bin/sofi3D
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Binary file modified SOFI3D_org/bin/sofi3D_acoustic
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124 changes: 62 additions & 62 deletions SOFI3D_org/par/in_and_out/sofi3D.jout
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Original file line number Diff line number Diff line change
Expand Up @@ -35,7 +35,7 @@ From input file ./in_and_out/sofi3D.json, 84 objects have been read in.
14 | DT | 6.6e-3
15 | SOURCE_SHAPE | 1
16 | SIGNAL_FILE | signal_mseis.tz
17 | SOURCE_TYPE | 4
17 | SOURCE_TYPE | 1
18 | SOURCE_ALPHA | 0.0
19 | SOURCE_BETA | 0.0
20 | AMON | 1.0e2
Expand Down Expand Up @@ -206,7 +206,7 @@ From input file ./in_and_out/sofi3D.json, 84 objects have been read in.
./sources/sources.dat

Wavelet of source: Ricker
Default type of source: point source with directive force in z-direction
Default type of source: explosive point source (concentrated at a single gridpoint)

------------------------- RECEIVER ------- -------------------
Receiver line:
Expand Down Expand Up @@ -347,7 +347,7 @@ Div and curl output will be as Energy with sign true for xz-plane.
Number of global source positions found: 1
If source positions are not exactly placed at a grid point, they are shifted to the nearest grid point.
x y z tshift fc amp stype
# 1 2592.000 2106.000 2592.000 0.000 5.000 1.000 4
# 1 2592.000 2106.000 2592.000 0.000 5.000 1.000 1



Expand Down Expand Up @@ -487,7 +487,7 @@ W A R N I N G M E S S A G E:

**Message from matcopy (written by PE 0):
Copy material properties at inner boundaries ...
finished (real time: 0.01 s).
finished (real time: 0.00 s).


**Message from av_mat (written by PE 0):
Expand Down Expand Up @@ -531,7 +531,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 1 : 0.09 s.
total real time for timestep 1 : 0.05 s.

Computing timestep 11 of 758
Real time for particle velocity update: 0.00 s.
Expand All @@ -540,11 +540,11 @@ W A R N I N G M E S S A G E:
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.00 s.
total real time for timestep 11 : 0.03 s.
total real time for timestep 11 : 0.02 s.

Computing timestep 21 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.02 s.
Real time for CPML stress tensor update: 0.01 s.
Expand All @@ -570,32 +570,32 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 31 : 0.10 s.
total real time for timestep 31 : 0.09 s.

Computing timestep 41 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.02 s.
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.04 s.
Real time for stress tensor exchange: 0.00 s.
total real time for timestep 41 : 0.08 s.
total real time for timestep 41 : 0.07 s.

Computing timestep 51 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.02 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.05 s.
Real time for stress tensor exchange: 0.00 s.
total real time for timestep 51 : 0.09 s.
Real time for CPML stress tensor update: 0.04 s.
Real time for stress tensor exchange: 0.01 s.
total real time for timestep 51 : 0.07 s.

Computing timestep 61 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.02 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.05 s.
Real time for CPML stress tensor update: 0.03 s.
Real time for stress tensor exchange: 0.01 s.


Expand All @@ -609,33 +609,33 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 61 : 0.15 s.
total real time for timestep 61 : 0.11 s.

Computing timestep 71 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for particle velocity exchange: 0.01 s.
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.04 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.02 s.
Real time for stress tensor exchange: 0.02 s.
total real time for timestep 71 : 0.10 s.
total real time for timestep 71 : 0.07 s.

Computing timestep 81 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.01 s.
Real time for stress tensor update: 0.01 s.
Real time for CPML stress tensor update: 0.03 s.
Real time for stress tensor exchange: 0.04 s.
total real time for timestep 81 : 0.10 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.03 s.
total real time for timestep 81 : 0.06 s.

Computing timestep 91 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.01 s.
Real time for particle velocity exchange: 0.02 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.01 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.02 s.
Real time for stress tensor exchange: 0.05 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.03 s.


PE 0 is writing snapshot-data at T=0.600600s to
Expand All @@ -648,33 +648,33 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 91 : 0.14 s.
total real time for timestep 91 : 0.10 s.

Computing timestep 101 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.02 s.
Real time for particle velocity exchange: 0.01 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.05 s.
total real time for timestep 101 : 0.08 s.
Real time for stress tensor exchange: 0.02 s.
total real time for timestep 101 : 0.04 s.

Computing timestep 111 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.01 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.04 s.
total real time for timestep 111 : 0.07 s.
Real time for stress tensor exchange: 0.01 s.
total real time for timestep 111 : 0.03 s.

Computing timestep 121 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.01 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.02 s.
Real time for stress tensor exchange: 0.00 s.


PE 0 is writing snapshot-data at T=0.798600s to
Expand All @@ -687,16 +687,16 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 121 : 0.09 s.
total real time for timestep 121 : 0.06 s.

Computing timestep 131 of 758
Real time for particle velocity update: 0.00 s.
Real time for CPML particle velocity update: 0.00 s.
Real time for particle velocity exchange: 0.00 s.
Real time for stress tensor update: 0.00 s.
Real time for CPML stress tensor update: 0.01 s.
Real time for stress tensor exchange: 0.01 s.
total real time for timestep 131 : 0.03 s.
Real time for stress tensor exchange: 0.00 s.
total real time for timestep 131 : 0.02 s.

Computing timestep 141 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -921,7 +921,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 301 : 0.06 s.
total real time for timestep 301 : 0.07 s.

Computing timestep 311 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -960,7 +960,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 331 : 0.06 s.
total real time for timestep 331 : 0.07 s.

Computing timestep 341 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -999,7 +999,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 361 : 0.06 s.
total real time for timestep 361 : 0.07 s.

Computing timestep 371 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1038,7 +1038,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 391 : 0.06 s.
total real time for timestep 391 : 0.07 s.

Computing timestep 401 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1077,7 +1077,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 421 : 0.06 s.
total real time for timestep 421 : 0.07 s.

Computing timestep 431 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1116,7 +1116,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 451 : 0.06 s.
total real time for timestep 451 : 0.07 s.

Computing timestep 461 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1155,7 +1155,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 481 : 0.06 s.
total real time for timestep 481 : 0.07 s.

Computing timestep 491 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1194,7 +1194,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 511 : 0.06 s.
total real time for timestep 511 : 0.07 s.

Computing timestep 521 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1233,7 +1233,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 541 : 0.06 s.
total real time for timestep 541 : 0.07 s.

Computing timestep 551 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1272,7 +1272,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 571 : 0.06 s.
total real time for timestep 571 : 0.08 s.

Computing timestep 581 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1311,7 +1311,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 601 : 0.06 s.
total real time for timestep 601 : 0.08 s.

Computing timestep 611 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1350,7 +1350,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 631 : 0.06 s.
total real time for timestep 631 : 0.08 s.

Computing timestep 641 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1389,7 +1389,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 661 : 0.06 s.
total real time for timestep 661 : 0.08 s.

Computing timestep 671 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1428,7 +1428,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 691 : 0.06 s.
total real time for timestep 691 : 0.08 s.

Computing timestep 701 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1467,7 +1467,7 @@ W A R N I N G M E S S A G E:
./snap/test.bin.div.000
./snap/test.bin.curl.000

total real time for timestep 721 : 0.06 s.
total real time for timestep 721 : 0.07 s.

Computing timestep 731 of 758
Real time for particle velocity update: 0.00 s.
Expand Down Expand Up @@ -1510,15 +1510,15 @@ W A R N I N G M E S S A G E:

**Info from function timing (written by PE 0)
Average times and standard deviations (in percent) for
velocity update: 0.000 seconds +/- 324.789 per cent
stress update: 0.001 seconds +/- 346.160 per cent
velocity exchange: 0.000 seconds +/- 490.096 per cent
stress exchange: 0.000 seconds +/- 870.253 per cent
timestep: 0.004 seconds +/- 378.695 per cent
velocity update: 0.000 seconds +/- 322.446 per cent
stress update: 0.000 seconds +/- 348.262 per cent
velocity exchange: 0.000 seconds +/- 399.567 per cent
stress exchange: 0.000 seconds +/- 687.619 per cent
timestep: 0.004 seconds +/- 372.497 per cent
PE 0 is writing timing information in ASCII format to log/test.log.0.timings

**Info from main (written by PE 0):
Total real time of program: 21.78 seconds.
Total real time of program: 18.39 seconds.

******************************************************
**************** SOFI3D has finished *****************
Expand Down
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