Cellular Automata Epidemic Models

These scripts are a "quick-to-test" precursor to the EpidemicSimulator project. The most interesting source is inside the "WorkingModels" directory which contains models that work.

Epidemic models:

• Stochastic Cellular Automata: SEIRS (Susceptible Exposed Infected Recovered), SIS, SIR, SEIS, SIRS
• Numerical ODE based: SIR with no birthds/deaths and SIR with birthds/deaths
• Cellular Automata "Forest Fire": SIR
• Coupled Lattice 2D: with Moore and von Neumann neighborhoods

Features:

• 2D image visualizations with PyGame.
• Graph visualizations and various random distributions with Numpy and PyLab.

Required compiler/plugins:

• Python 2.7 32bit version for win32.(package Python 3.4 Anaconda 2.3.0 Windows 32bit version from https://www.continuum.io/downloads). It includes Numpy (for numerics/random) and Pylab (for plots).
• IDE: PyCharm 4.5 Professional
• 2D graphics: PyGame version 19.2a0 Win32 for Python 3.4. (http://pygame.org/ftp/pygame-1.9.2a0.win32-py2.7.msi )