remove mention of UCSC, as this has changed/not always applicable #98
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plyranges currently has a WARNING in devel and release based upon a man page link:
http://bioconductor.org/checkResults/devel/bioc-LATEST/plyranges/
Note that the exported function name has changed in GenomeInfoDb:
https://github.com/Bioconductor/GenomeInfoDb/blob/master/NAMESPACE
But generally things are changing so it's not always UCSC that is used to build the seq info.
Here I manually updated the man pages instead of using roxygen, you may want to re-run on your end.