Release v1.0.0rc2 (#80)

* Added empty changelog

* Small doc changes

* Typo and reformat doc

* Fixed issue #68

* Added travis file

* Added branches safelist

* Removed python 3.2

* Added devel branch to travis safelist

* Updated pytest version

* Replcated tmpdir_factory with tmp_path_factory

* Fixed python version compatibility

* Fixed syntax error

* Casting pathlib objects to string for compatibility with python3.5

* Fixed python 3.5 compatibility error

* Fixed issue #68

* Removed trailing whitespace

* Added travis badge

* Skip many integration tests if running inside Travis

* Added conditional workflow for 3.5 version

* Lowered p-value tolerance for python 3.5

* Fixed typos in checking python version

* nbconvert is now installed bebore mknotebooks

* Further tolerance adjustment for python3.5

* Updated Changelog

* Clean up of travis yml file

* Added Slack notifications and automatic gh-pages deployment (#78)

* Updated release data and bumped version number

* Add Changelog to doc (#81)

* Workaround for issue #82

.travis.yml

@@ -0,0 +1,38 @@
+dist: xenial
+language: python
+stage: test
+python:
+  - 3.5
+  - 3.6
+  - 3.7
+branches:
+  only:
+  - master
+  - devel
+install:
+  - pip install 'pytest>=4.4.0' --upgrade
+  - pip install .
+script:
+  - pytest
+notifications:
+  slack:
+    secure: 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
+jobs:
+  include:
+    - stage: deploy
+      python: 3.7
+      install: 
+        - pip install nbconvert
+        - pip install mkdocs pymdown-extensions mknotebooks mkdocs-material
+      script:
+        - mkdocs build
+      deploy: &gh-pages
+        provider: pages
+        local_dir: site
+        skip_cleanup: true
+        keep_history: true
+        fqdn: nanocompore.rna.rocks
+        on:
+          branch: master
+        github_token:
+          secure: "v/yqJd0NF/4vgOWFOYuaxD8bUd9XESLc/K1H0Uer/Fwc/gQqzSJZ2CsqYeoI1dxOM9dNcQDVGi4bLTx0mXLI5fwmNbI3aLbBEBD5s3KCZ3PT0woFwnorPnpNHsDPm9aDAwg4Rc7S9ljdLByKBBJTItNBi0qD8nVaiVi0pGwM2pokjefkuM/tr0yUFMBxkjGOrNnboSd9JSSF+42uBN1ajb229jCiqMJWw0Q1K+B/+4KHBKaUgM0Bwt36kuCwQaZdoybxmMkdAK5hWaM8WBTQ7QIGqgHwkXQ1RkXK4dd1wE3SxfX4UNJb9SuiTslQn3rZGOJ9EA9XEGvePhI+G8w8HmxH3ps+y4QQLGf39mFLGJZgmHMzNoBfbpL8AKhk8g+T+bF4eVaJArXLy58dLKs97gBc6XJjxnqMn/we4roTHYHa1jSlTRlXXunmM8BNLXb8zck2nGUbBrtGPUvL7ZUs3LrlPN9AKLas4swWTJoPxFym0OG/0JXMu8nc/t7bc4jn7usZxThXvsjILUCocvjnvJ98NAxrCHDjFFJ0VJzNvhSx0PY2/VtIYe9wf6/Geb0NXrDHPImj/qlGewHN9s30YmOXf8TiEOKgBR3u3M1gy2jYtzXxlD5N6xWDFFteSZbc2uCiaiPvf9F+6Bo4q0jr5gcuEik9QJ6YffkrQ5NOO18="

CHANGELOG.md

@@ -0,0 +1 @@
+docs/changelog.md

README.md

@@ -4,6 +4,7 @@
 
 [![MIT license](https://img.shields.io/badge/License-MIT-blue.svg)](https://lbesson.mit-license.org/)
 [![made-with-python](https://img.shields.io/badge/Made%20with-Python-1f425f.svg)](https://www.python.org/)
+[![Build Status](https://travis-ci.com/tleonardi/nanocompore.svg?token=2uTrW9fP9RypfMALjksc&branch=master)](https://travis-ci.com/tleonardi/nanocompore)
 
 ---
 

docs/CNAME

@@ -0,0 +1 @@
+nanocompore.rna.rocks

docs/changelog.md

@@ -0,0 +1,10 @@
+# Changelog
+
+## [Unreleased]
+
+### Added
+- Continuous testing with Travis CI
+- Automatic deployment of docs to gh-pages
+
+### Fixed
+- Fixed "Not enough p-values" error. Issue #68