minimal example implementations for bioinformatics workflow managers
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Updated
Oct 27, 2021 - Python
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bioinformatics-workflows
Here are 5 public repositories matching this topic...
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
workflow bioinformatics genomics workflow-engine computational-biology next-generation-sequencing wdl cwl workflows cromwell wdl-workflow cwl-workflow bioinformatics-workflows stjudecloud
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Dec 20, 2024 - WDL
用于bioos的大规模数据分析
python workflow bioinformatics computational-biology next-generation-sequencing scrna-seq spatial-analysis atac-seq cromwell wdl-workflows cellranger bioinformatics-workflows bioos
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May 14, 2024 - WDL
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
workflow bioinformatics genomics workflow-engine next-generation-sequencing wdl cwl workflows cromwell wdl-workflow bioinformatics-workflows
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Feb 1, 2021 - WDL
Bash scripts replicating the commands from sandbox.bio's interactive bioinformatics tutorials, organized by categories such as Data Exploration, File Formats, Quality Control, and Data Analysis.
bash bam-files bioinformatics quality-control computational-biology data-analysis data-wrangling variant-calling data-exploration command-line-tools unix-shell sequence-alignment fastq-files bed-files file-formats fasta-files genomic-data bioinformatics-workflows sandbox-bio sandbox-bio-tutorials
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Dec 12, 2024 - Shell
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