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cell-state

Here are 5 public repositories matching this topic...

martinjzhang / scDRS

Single-cell disease relevance score (scDRS)

gwas single-cell-rna-seq cell-state diseases-and-complex-traits within-cell-type-heterogeneity

Updated Oct 18, 2024
Jupyter Notebook

sankaranlab / SCAVENGE

SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.

single-cell network-propagation random-walk complex-traits single-cell-analysis fine-mapping scatac-seq disease-mechanisms cell-heterogeneity cell-state cell-trajectory causal-celltype gwas-tool disease-celltype

Updated Sep 1, 2023
R

mehta-lab / dynamorph

Learn morphological states of dynamic cells

dimensionality-reduction vq-vae cell-state

Updated Apr 16, 2023
Jupyter Notebook

chenweng1991 / redeemR

R package for ReDeeM: single-cell Regulatory multi-omics with Deep Mitochondrial mutation profiling.

single-cell single-cell-genomics multi-omics cell-state lineage-tracing clonal-analysis

Updated Aug 24, 2024
Jupyter Notebook

Lan-lab / CIBER

CIBER is a causal inference framework for cell fate analysis

causal-inference cell-fate-determination cell-state

Updated Jun 20, 2024
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