Bayesian multi-object tracking

Cell tracking and segmentation software

A python algorithm for tracking cells in 3D time lapse images.

Track and lineage visualization with btrack and Napari 🌲

For cell segmentation and tracking.

Explainable AI model of cell behavior

(Biological) Cell Tracker for Microscopy Image Analysis

An R package for the analysis and interpretation of cell migration tracks.

Harness deep learning and bounding boxes to perform object detection, segmentation, tracking and more.

A Python module intended to make cell segmentation, tracking and subsequent (mostly biophysical) statisticial analysis easy

Distance-transform-prediction-based segmentation method used for our submission to the 6th edition of the ISBI Cell Tracking Challenge 2021 as team KIT-Sch-GE (2) (now KIT-GE (3)).

Microscopy image processing with TensorFlow

MigrationmineR is a R package to analyse and profile in vitro cell tracking and migration data. It is belongs to the cytominer-verse used for morphological profiling and allows to create temporal or dynamic profiles.

Ultrack From Images to Knowledge (I2k) 2024 Workshop

Track 2D cell motion and mitosis in time-lapse microscopy

Dual decomposition solvers for various cell tracking problem formulations based on the LP_MP library

A user-friendly tracking system for long-term migratory and proliferating cells

Official Implementation of our paper on Cell Tracker Algorithm for NPC Cell maturation profile understanding.

Official Implementation of our paper on Cell Tracker Algorithm for NPC Cell maturation profile understanding.