Project of ChIP-seq pipeline automatization for "Bioinformatics and Genomic Analysis" course at the University of Seville

Conducted ChIP-Seq peak-calling and motif discovery analyses using Bowtie2, SAMtools, MACS2, MEME-ChIP, and ChIPseeker, quantifying histone modification enrichment near TSS regions in glioblastoma and brain tumor datasets and refining functional genomic annotations by mapping motifs to target genes and regulatory loci.

Details of the ChIP-seq analysis for wheat