CARTMAN: Co-occurrence Analysis of Repeating Transcription-factor Motifs And Networks
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Updated
Dec 13, 2024 - Jupyter Notebook
CARTMAN: Co-occurrence Analysis of Repeating Transcription-factor Motifs And Networks
This is a brief exercise on co-occurrence networks employing real data from philosophy PUCP theses.
江戸川乱歩作品の分析アプリ. 形態素解析 / データ集計 / 共起ネットワークの機能を内包している
To explore diatom community structure dynamic and distribution over time (8years) around Australian coastal water (IMOS NRS station) and to identify abiotic (e.i. temperature, nutrients.. etc) and biotic (bacteria) factor that influence them. This was through analysis of 18S and 16S rRNA data available form the Australaian Microbiome Initiative.
Bibliography on the integration of Random Matrix Theory (RMT) into the Molecular Ecological Network Analysis (MENA)
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