#

commonwl

CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.

Here are 27 public repositories matching this topic...

common-workflow-language

common-workflow-language / common-workflow-language

Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

science workflow containers common-workflow-language cwl workflows commonwl sciworkflows

Updated Aug 10, 2024
Common Workflow Language

cwltool

common-workflow-language / cwltool

Common Workflow Language reference implementation

science containers common-workflow-language cwl workflows commonwl sciworkflows

Updated Nov 8, 2024
Python

Barski-lab / cwl-airflow

Python package to extend Airflow functionality with CWL1.1 support

workflow containers common-workflow-language cwl dag commonwl cwl-airflow cwl-descriptor

Updated Oct 25, 2023
Python

galaxyproject / planemo

Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.

cli sdk click usegalaxy hacktoberfest commonwl

Updated Oct 29, 2024
Python

rabix / bunny

[Legacy] Executor for CWL workflows. Executes sbg:draft-2 and CWL 1.0

java docker workflow executor common-workflow-language cwl commonwl

Updated Nov 18, 2020
Common Workflow Language

cwl-utils

common-workflow-language / cwl-utils

Python utilities for CWL

common-workflow-language cwl commonwl

Updated Nov 1, 2024
Python

common-workflow-lab / wdl2cwl

[Experimental] Workflow Definition Language (WDL) to CWL

wdl cwl commonwl wdl-workflow

Updated Nov 17, 2021
Python

common-workflow-lab / wdl-cwl-translator

A translator from WDL to CWL v1.2

wdl cwl commonwl

Updated Nov 1, 2024
Common Workflow Language

common-workflow-language / cwljava

Java SDK for the Common Workflow Language standards

java cwl commonwl

Updated Nov 4, 2024
Java

tom-tan / ep3

A workflow engine for CWL that aims to have a pluggable architecture

workflow workflow-engine common-workflow-language cwl commonwl

Updated Apr 3, 2022
Ruby

tom-tan / schema-salad-d

Salad validator library written in D

avro validator dlang commonwl salad

Updated Oct 18, 2024
D

tom-tan / cwl-template-for-vscode

A template to write CWL documents with VSCode with remote container extension

template vscode common-workflow-language cwl commonwl

Updated Aug 29, 2024
Dockerfile

tom-tan / shaft

A workflow engine for CWL CommandLineTool

workflow-engine commonwl

Updated Aug 30, 2024
D

cwl-upgrader

common-workflow-language / cwl-upgrader

Upgrade CWL syntax to a newer version

Updated Oct 23, 2024
Python

tom-tan / zatsu-cwl-generator

Simple CWL document generator from given execution commands

dlang common-workflow-language cwl commonwl

Updated Sep 7, 2022
D

drill-hawk

tom-tan / drill-hawk

A visualizer of workflow execution records for CWL

visualizer common-workflow-language cwl commonwl

Updated Apr 19, 2021
HTML

common-workflow-lab / cwl-language-server

A Language Server for CWL

language-server common-workflow-language cwl commonwl

Updated Jun 3, 2022
Python

common-workflow-lab / cwl-d-auto

Autogenerated classes for reading and writing CWL objects using the D language

parser dlang cwl commonwl

Updated Oct 25, 2024
Common Workflow Language

common-workflow-language / acd2cwl

CWL generator for ACD (EMBOSS) files

Updated Apr 29, 2021
Python

mr-c / hive-cwl-examples

commonwl biocompute-objects

Updated Jul 2, 2020

Created by Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community

Released January 2015

Followers: 13 followers
Organization: common-workflow-language
Website: www.commonwl.org
Wikipedia: Wikipedia