Skip to content
#

contaminating-sequences

Star

Here is 1 public repository matching this topic...

decontaminer

amarinderthind / decontaminer

Star 9

DecontaMiner is a tool designed and developed to investigate the presence of contaminating sequences in unmapped NGS data. It can suggest the presence of contaminating organisms in sequenced samples, that might derive either from laboratory contamination or from their biological source, and in both cases can be considered as worthy of further in…

bioinformatics rna-seq virus cancer ngs sequencing rnaseq bacteria omics fungus contamination investigation contamination-detection microbes infections unmapped-ngs-data contaminating-sequences decontaminer-pipeline decontaminer virusscan
  • Updated Oct 12, 2024
  • Perl

Improve this page

Add a description, image, and links to the contaminating-sequences topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the contaminating-sequences topic, visit your repo's landing page and select "manage topics."

Learn more