A model to assess the global risk of Pierce's Disease of grapevines

Contains functions to simulate data from and fit SIR multievent models

"Slow recovery from a disease epidemic in the spotted hyena, a keystone social carnivore"

Scripts used to prepare the "Pathogen invasion history elucidates contemporary host pathogen dynamics" publication by Vredenburg et al. (2019)

Analyzing dust concentration by land use type in coccidioidomycosis endemic regions in the CA Central Valley

Predicting Ebolavirus disease risk and the role of African bat birthing

Scripts used in the publication "Continent-wide recent emergence of a global pathogen in African amphibians" by Ghose et al. (2023)

DiRenzo G. V., Che‐Castaldo C., Saunders S. P., Campbell Grant E. H., Zipkin E. F. 2019. Disease‐structured N‐mixture models: A practical guide to model disease dynamics using count data. Ecology and Evolution 9: 899–909.

Schistosome mesocosm data for cercariae shedding rates in size structured host population