Machine Learning models for in vitro enzyme kinetic parameter prediction

A Python parser for the BRENDA database

Python toolkit and package for analyzing enzyme activity data

LBplot is a python program to plot Lineweaver-Burk double reciprocal plots and calculate basic statistics from V0 and [S] data.

🔬 mtphandler is Python package for processing, enriching, and converting microtiter plate data into standardized EnzymeML time-course data, ready for data science

A Python module for analysis and visualization of dose-response data

Organize and analyze plate-reader data from 96-well plate kinetics experiments. Specifically tailored for PGO assays but can be modified to fit many more.

A QM-MM Tutorial of Enzyme Reaction Dynamics

This repository contains the code, data, and analysis scripts for our RNA-Seq gene expression study of adult ruff sandpipers (Calidris pugnax). This study explores morph-specific differences in gene expression and steroid hormone metabolism, focusing on the key enzyme HSD17B2.

Stochastic chemical kinetics using Gillespie algorithm and chemical master equation, application to enzyme kinetics

A library for parsing out data from the BRENDA database html files

Thermodynamics can present itself as kinetic inhibition

Enzyme kinetic assays in the Fluidigm Biomark HD instrument

steady-state rate equations for enzyme-catalyzed reactions

Enzyme Kinetics in R

A library for generalized kinetics format

MSc thesis submitted to University of Hertfordshire

Michaelis-Menten equations in Matlab

📕 - Kinetic modeling workflow

Analysis of Michaelis–Menten enzyme kinetics using the Lineweaver–Burk plot