gdc-server

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A Python script to create scatter plots from files containing integrated GDC RNA expression data.

python data correlation pandas-dataframe python-script tcga pandas python3 dataset cancer-genome-atlas dataframe tcga-data gdc-server python-gdc

Python script to create a heatmap based on correlations in GDC expression data of PTEN with other genes.

python data clustering pandas-dataframe heatmap python-script tcga pandas python3 dataset cancer-genome-atlas matplotlib dataframe tcga-data gdc-server python-gdc

Python script to download files from the GDC server

python http json cancer python-script api-client python3 http-requests cancer-genomics cancer-genome-atlas restful-api web-service-client gdc-server

Python script to integrate files downloaded from the GDC server and normalized.

python data pandas-dataframe python-script data-frame tcga pandas python3 dataset cancer-genome-atlas dataframe python36 tcga-data gdc-server python-gdc

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