Final Project - Post Genomic Analysis

Advanced bioinformatics analysis of RNA sequencing data and genomic databases using R. Explore allelic imbalances, SNP variants, and phylogenetic trees to uncover genetic insights and visualize complex data interactions.

Extracting gene variants from supplemental data files of human genomics research articles.

NCBI Medical Genetics, UMLS Unified Medical Language System Concepts and PubMed linked citations

Repository for method to analyse the relationship between germline variants and somatic mutations and alternative splicing in breast cancer patients based on RNA-Seq data,

DNAc is a programming language for DNAs.

Decentralized data market for GenoPharmatic information

The general impact of haploinsufficiency on brain connectivity underlies the pleiotropic effect of neuropsychiatric CNVs

Data repository for NeurIPS 2022 LMRL workshop paper.

Manifold learning for single-cell single-nucleotide genetic variations

The transplot package can be used to make multi-track plots of Next Generation Sequencing (NGS) data for gene transcripts, namely for depth of coverage and for the distribution of variants and protein domains.

Collection of scripts to map eQTL with RNAseq Data and Genotype by Sequencing

At The ODIN, we believe the future is going to be dominated by genetic engineering and consumer genetic design will be a big part of that. We are making that happen by creating kits and tools that allow anyone to make unique and usable organisms at home or in a lab or anywhere.

Bioinformatic approach to identify functional transcription factor binding motifs

Thesaurus for genetic variants

Convolutional Embedded Networks for Population Scale Clustering and Bio-ancestry Inferencing

Regulatory Element Locus Intersection (RELI) Analysis

An R package for the Latent Environmental & Genetic InTeraction (LEGIT) model