This repository contains code to analyze single-nuclei RNA sequencing data from the ventrobasal thalamus and principal sensory trigeminal nucleus in neonatal mice. It performs quality control, clustering, and identification of marker genes to characterize cell types and their interconnectivity during early whisker pathway development.
reproducibility single-cell-rna-sequencing-analysis neuronal-connectivity-and-development quality-control-filtering-single-nuclei graph-based-clustering-leiden-algorithm marker-gene-identification cell-type-characterization developmental-neuroscience whisker-system-somatosensory-pathway neuronal-connectivity-development
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Updated
Jan 19, 2024 - R