gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
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Dec 15, 2023 - R
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gwas-catalog
Here are 17 public repositories matching this topic...
pandasGWAS: a Python package for easy retrieval of GWAS Catalog data
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Jun 14, 2024 - Python
A curated list (with links) of useful tools for genome-wide association analysis.
swiss gwas metal meta-analysis gwas-catalog genome-analysis manhattan-plot skat qqplot emmax locuszoom genetic-epidemiology gwas-tools mmlr
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Mar 1, 2019
Make interactive LocusZoom plots from a local GWAS file
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Mar 4, 2023 - Vue
Analysis of regulatory impacts of autism-associated SNPs on biological pathways in the fetal and adult cortex.
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Sep 20, 2021 - HTML
Computational Strategies in Nutrigenetics: Constructing a Reference Dataset of Nutrition-Associated Genetic Polymorphisms https://doi.org/10.1101/2023.08.04.23293659
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Nov 25, 2024 - Jupyter Notebook
R package to access GWAS Catalog FTP data
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Jan 29, 2024 - R
Analysis of genotype data from 23andMe DNA testing.
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Nov 8, 2018 - R
Snakemake workflow designed to annotate VCF files withe SnpEff / SniSift
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Feb 18, 2021 - Python
Extracting disease-gene associations from the GWAS Catalog
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Mar 26, 2016 - Jupyter Notebook
Simple wrapper for the GWAS Catalog
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Apr 23, 2016 - Python
An Alfred workflow to browse the GWAS catalog
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May 17, 2023 - Python
Cancer variant data from genome-wide association studies (GWAS)
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Dec 4, 2024 - R
tool for probabilistic correction of Winner's Curse in two-stage GWAS
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Aug 22, 2023 - R
EDA of different databases to extract IBD-relevant genes, their coverage in a 10X Genomics spatial transcriptomics panel and the main cell types and tissues related to these genes.
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May 18, 2024 - Jupyter Notebook
De novo discovery of traits co-occurring with chronic obstructive pulmonary disease.
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Mar 27, 2023 - HTML
Easily install and load the hapiverse
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May 1, 2021 - R
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