Long-read haplotyping of small sequences with SNP-encoded de Bruijn graphs
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Updated
Sep 30, 2024 - Rust
Long-read haplotyping of small sequences with SNP-encoded de Bruijn graphs
An add-on to floria for clustering reads into strains
Y-DNA and mtDNA Haplotyping for WeGene, It features DFS algorithm and specific rules to search the most appropriate terminal haplotype based on haplogroup tree which should contain SNP information with position and derived mutation.
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