TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
-
Updated
Sep 16, 2021 - R
TIGS (Tumor Immunogenicity Score) project https://doi.org/10.7554/eLife.49020
IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening
pTuneos: prioritizing Tumor neoantigen from next-generation sequencing data
Multifactorial modeling of response to checkpoint inhibitor immunotherapy from tumor, immune, and clinical features
Analysis of single-cell RNA-seq data from patients with immunotherapy-related colitis.
MSIsensor-RNA: Microsatellite instability detection using RNA sequencing data
Discrete Event Simulation | Queue Modeling | Bayesian Optimization | Full Factorial Design. "Design and Operation of Individualized Single-use Systems: Car-T Cell Therapy". Modeling Single-use systems using stochastic optimization techniques.
A poster showing TIGS project at BioForum2019, ShanghaiTech University
Code and data to support doi:10.1136/jitc-2020-001506
Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution
A machine learning based method for predicting, scanning and mapping allergenic regions in an allergen
Modeling Tumor Escape Mechanisms for DC-Based Immunotherapy
Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.
Analysis associated with the publication, "Change in neutrophil to lymphocyte ratio during immunotherapy treatment is a non-linear predictor of patient outcomes in advanced cancers" DOI : 10.1007/s00432-019-02982-4
Analysis of single-cell RNA-seq data from patients with immunotherapy-related myocarditis.
Prediction of interferon-gamma inducing peptides using alignment-based and alignment-free methods
This project aims to model the disruptive effects of cytotoxic chemotherapeutic drugs on the immunoediting process.
T-cell receptor specificity prediction using Deep Learning
An example of immunopipe
Add a description, image, and links to the immunotherapy topic page so that developers can more easily learn about it.
To associate your repository with the immunotherapy topic, visit your repo's landing page and select "manage topics."