analysis related to the FITNESS Study at OSU

Analyses of Penter et al., Blood Cancer Discovery 2024

Prediction of interferon-gamma inducing peptides using alignment-based and alignment-free methods

Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.

IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening

An example of immunopipe

Files and code used to generate the CARTAR app to identify and validate CAR targets for cancer treatment.

MSIsensor-RNA: Microsatellite instability detection using RNA sequencing data

Analysis of single-cell RNA-seq data from patients with immunotherapy-related myocarditis.

Analysis of single-cell RNA-seq data from patients with immunotherapy-related colitis.

Executable of trained model presented in Boll&Vázquez Montes de Oca et al. (unpublished).

Modeling Tumor Escape Mechanisms for DC-Based Immunotherapy

A machine learning based method for predicting, scanning and mapping allergenic regions in an allergen

Code for contribution to Fig. 8 of Talvard-Balland et al., JCI 2024

T-cell receptor specificity prediction using Deep Learning

Multimodal immunogenomic biomarker analysis of tumours from pediatric patients enrolled to a phase 1-2 study of single-agent atezolizumab

Graph analytics for immunotherapeutic response prediction for metastatic melanoma patients

Pan-cancer quantification of neoantigen-mediated immunoediting in cancer evolution

Wart Immunotherapy Prediction is a medical decision support system that helps doctors to decide whether Immunotherapy is the right treatment method for their patients.